The 2.0 version of rSNPBase

Variant report

Variant rs11805285
Chromosome Location chr1:220351723-220351724
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:220305400-220376600 Strong transcription Monocytes-CD14+_RO01746 blood
2 chr1:220325000-220398400 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr1:220325400-220356000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
4 chr1:220330600-220363600 Weak transcription Fetal Brain Male brain
5 chr1:220330800-220378600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr1:220331800-220354000 Weak transcription Right Ventricle heart
7 chr1:220332200-220352800 Strong transcription Cortex derived primary cultured neurospheres brain
8 chr1:220337000-220352200 Strong transcription Fetal Intestine Large intestine
9 chr1:220341000-220353800 Weak transcription Psoas Muscle Psoas
10 chr1:220341000-220361000 Weak transcription Small Intestine intestine
11 chr1:220341200-220364000 Weak transcription ES-I3 Cell Line embryonic stem cell
12 chr1:220341200-220369200 Weak transcription Fetal Heart heart
13 chr1:220342200-220352200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr1:220343800-220357200 Strong transcription Breast Myoepithelial Primary Cells Breast
15 chr1:220344800-220365600 Weak transcription Brain Substantia Nigra brain
16 chr1:220345200-220361200 Weak transcription Primary T killer memory cells from peripheral blood blood
17 chr1:220345400-220354000 Weak transcription Brain Anterior Caudate brain
18 chr1:220345400-220354000 Weak transcription Brain Cingulate Gyrus brain
19 chr1:220345400-220354000 Weak transcription Colon Smooth Muscle Colon
20 chr1:220345400-220354400 Weak transcription Brain Inferior Temporal Lobe brain
21 chr1:220345400-220361800 Weak transcription Colonic Mucosa Colon
22 chr1:220345400-220391400 Weak transcription Pancreatic Islets Pancreatic Islet
23 chr1:220345600-220361400 Weak transcription iPS-15b Cell Line embryonic stem cell
24 chr1:220346400-220354000 Weak transcription Osteobl bone
25 chr1:220346600-220353800 Weak transcription A549 lung
26 chr1:220346600-220354000 Weak transcription Stomach Smooth Muscle stomach
27 chr1:220346600-220354000 Weak transcription NHDF-Ad bronchial
28 chr1:220346600-220358000 Weak transcription Primary T killer naive cells fromperipheralblood blood
29 chr1:220346600-220360800 Weak transcription Fetal Kidney kidney
30 chr1:220346600-220363600 Weak transcription Brain Angular Gyrus brain
31 chr1:220347000-220354400 Weak transcription HMEC breast
32 chr1:220347200-220353800 Weak transcription iPS-20b Cell Line embryonic stem cell
33 chr1:220347200-220354000 Weak transcription NH-A brain
34 chr1:220347200-220355600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
35 chr1:220347600-220351800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr1:220348000-220352200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
37 chr1:220348000-220352400 Strong transcription Primary T cells from cord blood blood
38 chr1:220348000-220357800 Strong transcription Primary T cells fromperipheralblood blood
39 chr1:220348000-220386800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr1:220348200-220356400 Strong transcription Primary B cells from peripheral blood blood
41 chr1:220349000-220352400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr1:220349200-220352400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr1:220349600-220351800 Strong transcription Primary T helper naive cells fromperipheralblood blood
44 chr1:220349600-220352400 Strong transcription Fetal Muscle Leg muscle
45 chr1:220349600-220356800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
46 chr1:220349600-220369600 Strong transcription Primary monocytes fromperipheralblood blood
47 chr1:220349800-220352200 Strong transcription Primary T regulatory cells fromperipheralblood blood
48 chr1:220349800-220352600 Strong transcription Left Ventricle heart
49 chr1:220349800-220353000 Strong transcription Primary hematopoietic stem cells blood
50 chr1:220349800-220356400 Strong transcription Fetal Lung lung

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Last update: Aug 31, 2015