Variant report

Variant rs3754060
Chromosome Location chr1:220292136-220292137
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:220268400-220293400 Weak transcription Stomach Mucosa stomach
2 chr1:220268400-220330200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr1:220268600-220293800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr1:220269200-220292800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
5 chr1:220269200-220293600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr1:220269400-220330000 Weak transcription iPS-15b Cell Line embryonic stem cell
7 chr1:220269800-220292800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
8 chr1:220270000-220292800 Strong transcription Primary B cells from peripheral blood blood
9 chr1:220270600-220293800 Strong transcription Primary monocytes fromperipheralblood blood
10 chr1:220272000-220293200 Strong transcription Dnd41 blood
11 chr1:220278600-220316200 Weak transcription Pancreas Pancrea
12 chr1:220281200-220295200 Weak transcription Right Atrium heart
13 chr1:220281400-220300600 Weak transcription NHLF lung
14 chr1:220281400-220307200 Weak transcription Brain Angular Gyrus brain
15 chr1:220281400-220307800 Weak transcription Psoas Muscle Psoas
16 chr1:220281400-220314400 Weak transcription Fetal Brain Male brain
17 chr1:220283000-220292800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
18 chr1:220283000-220292800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr1:220284600-220301400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr1:220284600-220305600 Weak transcription Small Intestine intestine
21 chr1:220284600-220307400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
22 chr1:220284600-220307800 Weak transcription Spleen Spleen
23 chr1:220284600-220313000 Weak transcription H9 Cell Line embryonic stem cell
24 chr1:220284600-220313600 Weak transcription Gastric stomach
25 chr1:220284600-220324600 Weak transcription ES-I3 Cell Line embryonic stem cell
26 chr1:220284800-220292400 Weak transcription Fetal Heart heart
27 chr1:220284800-220300000 Weak transcription Brain Inferior Temporal Lobe brain
28 chr1:220284800-220301600 Weak transcription Primary T killer naive cells fromperipheralblood blood
29 chr1:220285400-220299600 Weak transcription Primary T helper naive cells fromperipheralblood blood
30 chr1:220286400-220292800 Strong transcription Primary B cells from cord blood blood
31 chr1:220286600-220292600 Strong transcription NHDF-Ad bronchial
32 chr1:220286800-220292800 Strong transcription HUES64 Cell Line embryonic stem cell
33 chr1:220286800-220292800 Strong transcription Monocytes-CD14+_RO01746 blood
34 chr1:220287000-220292600 Strong transcription Primary T helper cells PMA-I stimulated --
35 chr1:220287200-220292800 Strong transcription Primary T regulatory cells fromperipheralblood blood
36 chr1:220288000-220300000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
37 chr1:220288200-220324600 Weak transcription ES-WA7 Cell Line embryonic stem cell
38 chr1:220288400-220292400 Weak transcription HepG2 liver
39 chr1:220288400-220295200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
40 chr1:220288400-220310200 Weak transcription Primary T killer memory cells from peripheral blood blood
41 chr1:220289200-220298600 Weak transcription Osteobl bone
42 chr1:220289200-220300000 Weak transcription Placenta Amnion Placenta Amnion
43 chr1:220289400-220299000 Weak transcription GM12878-XiMat blood
44 chr1:220289400-220301600 Weak transcription Esophagus oesophagus
45 chr1:220289600-220292400 Weak transcription Aorta Aorta
46 chr1:220289600-220297200 Weak transcription Right Ventricle heart
47 chr1:220289600-220299000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
48 chr1:220289600-220301400 Weak transcription Fetal Kidney kidney
49 chr1:220289600-220301600 Weak transcription Brain Substantia Nigra brain
50 chr1:220289600-220307800 Weak transcription Thymus Thymus

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