Variant report

Variant	rs11816959
Chromosome Location	chr10:44975705-44975706
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs11814181	1.00[AMR][1000 genomes]
rs11818541	1.00[AMR][1000 genomes]
rs11819677	1.00[AMR][1000 genomes]
rs56882503	1.00[AMR][1000 genomes]
rs58076062	1.00[AMR][1000 genomes]
rs73281344	1.00[AMR][1000 genomes]
rs73281355	1.00[AMR][1000 genomes]
rs73281358	1.00[AMR][1000 genomes]
rs73281371	1.00[AMR][1000 genomes]
rs73281394	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv895101	chr10:44909081-45007131	Enhancers Bivalent Enhancer Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv947901	chr10:44974108-45000726	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44972000-44976000	Enhancers	Ovary	ovary
2	chr10:44972800-44975800	Weak transcription	Right Ventricle	heart
3	chr10:44973200-44976200	Enhancers	Adipose Nuclei	Adipose
4	chr10:44973600-44976000	Enhancers	Primary monocytes fromperipheralblood	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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