Variant report

Variant	rs73281344
Chromosome Location	chr10:45049354-45049355
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs11814181	1.00[AMR][1000 genomes]
rs11816437	1.00[AMR][1000 genomes]
rs11816959	1.00[AMR][1000 genomes]
rs11818541	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs11819677	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs55671828	1.00[AMR][1000 genomes]
rs56882503	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs58076062	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs60838225	1.00[AMR][1000 genomes]
rs73281355	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs73281358	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs73281361	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs73281365	0.84[EUR][1000 genomes]
rs73281371	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs73281394	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs74138457	1.00[AMR][1000 genomes]
rs74138459	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2422287	chr10:45044161-45257684	Active TSS Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:45044600-45070200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr10:45048800-45050000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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