Variant report

Variant	rs11820418
Chromosome Location	chr11:59682985-59682986
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs11819937	1.00[AMR][1000 genomes]
rs11821828	1.00[AMR][1000 genomes]
rs11822263	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11822304	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11826341	1.00[AMR][1000 genomes]
rs17154275	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56911514	1.00[AMR][1000 genomes]
rs60984215	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv334	chr11:59663800-59709104	ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv1045477	chr11:59664372-59714143	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:59680600-59685200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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