Variant report

Variant	rs1182996
Chromosome Location	chr10:61677880-61677881
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs1149662	0.85[CEU][hapmap]
rs1171838	1.00[CEU][hapmap];0.94[YRI][hapmap]
rs1171840	1.00[CEU][hapmap];0.83[YRI][hapmap]
rs1171842	1.00[CEU][hapmap];0.85[TSI][hapmap]
rs1684909	1.00[CEU][hapmap]
rs1684910	0.88[ASW][hapmap];1.00[CEU][hapmap];0.92[LWK][hapmap];0.83[MKK][hapmap];1.00[TSI][hapmap];0.94[YRI][hapmap]
rs2440915	0.88[ASW][hapmap];1.00[CEU][hapmap];1.00[LWK][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.94[YRI][hapmap]
rs2440919	0.94[YRI][hapmap]
rs2450452	1.00[CEU][hapmap];0.94[YRI][hapmap]
rs41347048	1.00[CEU][hapmap];1.00[TSI][hapmap]
rs7068392	0.85[TSI][hapmap]
rs7090532	0.85[TSI][hapmap]
rs7894317	1.00[CEU][hapmap]
rs7894427	0.82[CEU][hapmap];1.00[TSI][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1800316	chr10:61639599-61700473	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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