Variant report

Variant rs11854486
Chromosome Location chr15:50952670-50952671
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:50854600-50957400 Strong transcription Primary T helper cells fromperipheralblood blood
2 chr15:50869800-50967600 Strong transcription Monocytes-CD14+_RO01746 blood
3 chr15:50871600-50957600 Strong transcription Primary monocytes fromperipheralblood blood
4 chr15:50894400-50955600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
5 chr15:50895000-50954400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr15:50895200-50959000 Strong transcription Liver Liver
7 chr15:50906400-50977400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr15:50908000-50961800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
9 chr15:50916000-50959200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
10 chr15:50917600-50957400 Strong transcription Fetal Intestine Large intestine
11 chr15:50919200-50967800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr15:50921600-50967600 Weak transcription Pancreatic Islets Pancreatic Islet
13 chr15:50923400-50977600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
14 chr15:50923600-50977600 Weak transcription Brain Substantia Nigra brain
15 chr15:50925800-50959000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
16 chr15:50926200-50959200 Strong transcription Fetal Intestine Small intestine
17 chr15:50926200-50959600 Strong transcription Fetal Stomach stomach
18 chr15:50928800-50958400 Weak transcription Esophagus oesophagus
19 chr15:50929200-50969200 Weak transcription Small Intestine intestine
20 chr15:50930000-50968000 Weak transcription Fetal Kidney kidney
21 chr15:50935000-50975800 Weak transcription Pancreas Pancrea
22 chr15:50935200-50967600 Weak transcription Primary T killer memory cells from peripheral blood blood
23 chr15:50937200-50956000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
24 chr15:50938000-50954800 Strong transcription Breast Myoepithelial Primary Cells Breast
25 chr15:50938400-50955200 Strong transcription HUES64 Cell Line embryonic stem cell
26 chr15:50938800-50976200 Weak transcription Gastric stomach
27 chr15:50939400-50975400 Weak transcription Brain Angular Gyrus brain
28 chr15:50940600-50956400 Strong transcription Dnd41 blood
29 chr15:50942000-50969000 Weak transcription ES-I3 Cell Line embryonic stem cell
30 chr15:50943200-50969400 Weak transcription Psoas Muscle Psoas
31 chr15:50943400-50959400 Weak transcription Colonic Mucosa Colon
32 chr15:50943400-50973600 Weak transcription Primary T helper naive cells from peripheral blood blood
33 chr15:50943400-50975200 Weak transcription Spleen Spleen
34 chr15:50944400-50957000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr15:50944800-50958800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr15:50945000-50955000 Strong transcription Rectal Mucosa Donor 29 rectum
37 chr15:50945400-50969000 Weak transcription Right Atrium heart
38 chr15:50946000-50961200 Weak transcription Primary T killer naive cells fromperipheralblood blood
39 chr15:50946200-50957400 Weak transcription Brain Germinal Matrix brain
40 chr15:50946200-50961200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
41 chr15:50946200-50963000 Weak transcription Right Ventricle heart
42 chr15:50946200-50968000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
43 chr15:50946200-50969200 Weak transcription Stomach Mucosa stomach
44 chr15:50946200-50977200 Weak transcription Rectal Smooth Muscle rectum
45 chr15:50946400-50969000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
46 chr15:50946800-50956400 Strong transcription Duodenum Mucosa Duodenum
47 chr15:50946800-50977600 Weak transcription Brain Cingulate Gyrus brain
48 chr15:50947000-50953600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr15:50947200-50960400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr15:50947400-50955400 Strong transcription Primary T cells fromperipheralblood blood

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