Variant report

Variant	rs10519284
Chromosome Location	chr15:51003042-51003043
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr15:51002504..51004008-chr15:51010969..51013799,2	MCF-7	breast:
2	chr15:51002396..51005711-chr15:51008166..51010003,3	MCF-7	breast:
3	chr15:51000299..51003362-chr15:51056520..51058817,3	MCF-7	breast:
4	chr15:50980290..50983121-chr15:51000968..51004015,3	K562	blood:
5	chr15:50997913..51000096-chr15:51002715..51004859,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000243027	Chromatin interaction
ENSG00000138600	Chromatin interaction

Extended variants
information (count: 146 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:119)

rs_ID	r²[population]
rs10400817	1.00[YRI][hapmap]
rs1052459	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11635825	1.00[CHB][hapmap];0.83[CHD][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs11854486	0.88[ASN][1000 genomes]
rs11854949	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs11855370	1.00[YRI][hapmap];0.90[AFR][1000 genomes]
rs11856886	1.00[YRI][hapmap];0.90[AFR][1000 genomes]
rs11858096	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11858301	0.86[ASN][1000 genomes]
rs12440570	1.00[YRI][hapmap]
rs12442145	1.00[YRI][hapmap]
rs12898588	1.00[ASW][hapmap];0.87[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.94[JPT][hapmap];0.84[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12899074	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.85[MEX][hapmap];1.00[TSI][hapmap];0.84[ASN][1000 genomes]
rs12899181	0.86[ASN][1000 genomes]
rs12899321	0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12899517	0.86[ASN][1000 genomes]
rs12899580	0.84[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs12899581	0.81[ASN][1000 genomes]
rs12899700	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.92[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12899943	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12900933	0.85[CEU][hapmap];0.82[CHB][hapmap];0.94[JPT][hapmap];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12901275	0.81[ASN][1000 genomes]
rs12901621	0.84[ASN][1000 genomes]
rs12902399	0.88[EUR][1000 genomes]
rs12902741	0.90[AFR][1000 genomes]
rs12903573	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12904353	0.87[CEU][hapmap];0.94[JPT][hapmap];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12904617	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12904729	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12905120	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs12905474	0.81[ASN][1000 genomes]
rs12905720	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12906219	0.88[ASN][1000 genomes]
rs12906675	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs12906820	0.81[ASN][1000 genomes]
rs12906839	1.00[YRI][hapmap]
rs12907202	0.81[ASN][1000 genomes]
rs12907387	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs12907472	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.85[MEX][hapmap];1.00[TSI][hapmap];0.81[ASN][1000 genomes]
rs12907922	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.85[MEX][hapmap];0.95[TSI][hapmap];0.81[ASN][1000 genomes]
rs12908546	1.00[CEU][hapmap];0.85[CHB][hapmap];0.86[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12909927	0.94[ASN][1000 genomes]
rs12910233	0.81[AFR][1000 genomes]
rs12910276	0.94[ASN][1000 genomes]
rs12910613	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12911143	1.00[YRI][hapmap]
rs12911654	1.00[CEU][hapmap];0.85[CHB][hapmap];0.93[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12911753	1.00[ASW][hapmap];0.83[CHD][hapmap];0.95[GIH][hapmap];0.87[JPT][hapmap];0.84[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.95[TSI][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12911938	0.90[AFR][1000 genomes]
rs12912192	0.82[CHB][hapmap];0.83[CHD][hapmap];0.94[JPT][hapmap]
rs12912793	0.92[AMR][1000 genomes];0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12912835	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12912841	0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12912921	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12913081	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];0.88[ASN][1000 genomes]
rs12913464	0.95[AFR][1000 genomes];0.86[AMR][1000 genomes];0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12913494	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12913657	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12913733	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12915001	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12915052	1.00[YRI][hapmap];0.90[AFR][1000 genomes]
rs12915606	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12915708	1.00[YRI][hapmap]
rs12916113	1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs12916122	0.84[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs12916510	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs12917005	1.00[YRI][hapmap]
rs12917462	0.88[EUR][1000 genomes]
rs16973487	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs17646025	1.00[YRI][hapmap]
rs28641162	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28670009	0.89[AFR][1000 genomes]
rs28736316	1.00[ASW][hapmap]
rs2928138	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs34885055	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs35148930	0.84[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs35178604	0.81[ASN][1000 genomes]
rs35314460	0.81[ASN][1000 genomes]
rs35597009	0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs35725584	0.94[ASN][1000 genomes]
rs35753060	0.84[ASN][1000 genomes]
rs35849698	0.81[ASN][1000 genomes]
rs36071575	0.81[ASN][1000 genomes]
rs3809501	1.00[YRI][hapmap]
rs4511475	0.90[AFR][1000 genomes]
rs485324	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs531366	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.85[MEX][hapmap];1.00[TSI][hapmap]
rs540257	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs543821	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs555569	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs600724	0.81[ASN][1000 genomes]
rs615835	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.85[MEX][hapmap];1.00[TSI][hapmap]
rs623639	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.85[MEX][hapmap];1.00[TSI][hapmap]
rs623652	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs625022	0.81[ASN][1000 genomes]
rs646856	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs6493449	0.81[ASN][1000 genomes]
rs67588397	0.86[ASN][1000 genomes]
rs71395001	0.83[ASN][1000 genomes]
rs71395002	0.94[ASN][1000 genomes]
rs71397503	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71397504	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71397507	0.86[EUR][1000 genomes]
rs7165492	1.00[ASW][hapmap];0.87[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.94[JPT][hapmap];0.84[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7165684	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs7170445	0.86[ASN][1000 genomes]
rs7173321	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs7179565	0.84[ASN][1000 genomes]
rs7179641	0.84[ASN][1000 genomes]
rs7183014	1.00[YRI][hapmap]
rs8028610	1.00[YRI][hapmap];0.90[AFR][1000 genomes]
rs8029941	0.86[ASN][1000 genomes]
rs8037161	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs8037587	0.90[ASN][1000 genomes]
rs8042919	1.00[JPT][hapmap]
rs958572	0.90[AFR][1000 genomes]
rs9920018	0.86[ASN][1000 genomes]
rs9920083	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9920162	0.90[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:27 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1045456	chr15:50592472-51019873	Strong transcription Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Enhancers ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	121 gene(s)	inside rSNPs	diseases
2	nsv948579	chr15:50645530-51045564	Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	119 gene(s)	inside rSNPs	diseases
3	nsv1053966	chr15:50715572-51133186	Flanking Active TSS Weak transcription Strong transcription Active TSS Enhancers Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	65 gene(s)	inside rSNPs	diseases
4	nsv542383	chr15:50715572-51133186	Strong transcription Weak transcription Enhancers Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	65 gene(s)	inside rSNPs	diseases
5	nsv1043805	chr15:50715572-51208891	Genic enhancers Enhancers Weak transcription Active TSS Strong transcription ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	82 gene(s)	inside rSNPs	diseases
6	nsv542384	chr15:50715572-51208891	Strong transcription Flanking Active TSS Weak transcription Enhancers Genic enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	82 gene(s)	inside rSNPs	diseases
7	nsv1047443	chr15:50744781-51647023	Strong transcription Active TSS Weak transcription Genic enhancers Enhancers Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	82 gene(s)	inside rSNPs	diseases
8	nsv1051990	chr15:50745814-51133186	Enhancers Strong transcription Weak transcription Active TSS Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
9	nsv1054970	chr15:50761410-51036625	Strong transcription Weak transcription ZNF genes & repeats Enhancers Active TSS Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
10	nsv457134	chr15:50770868-51184583	Enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	54 gene(s)	inside rSNPs	diseases
11	nsv471242	chr15:50770868-51184583	Genic enhancers ZNF genes & repeats Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	54 gene(s)	inside rSNPs	diseases
12	nsv569396	chr15:50770868-51184583	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	54 gene(s)	inside rSNPs	diseases
13	nsv457135	chr15:50770868-51189707	ZNF genes & repeats Enhancers Weak transcription Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	54 gene(s)	inside rSNPs	diseases
14	nsv569397	chr15:50770868-51189707	Strong transcription Active TSS Weak transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	54 gene(s)	inside rSNPs	diseases
15	nsv1048621	chr15:50775451-51115535	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	47 gene(s)	inside rSNPs	diseases
16	nsv1047039	chr15:50782070-51187804	Enhancers Strong transcription Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	54 gene(s)	inside rSNPs	diseases
17	nsv542385	chr15:50782070-51187804	Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	54 gene(s)	inside rSNPs	diseases
18	nsv457136	chr15:50789125-51294995	Strong transcription ZNF genes & repeats Weak transcription Active TSS Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
19	nsv569398	chr15:50789125-51294995	Enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
20	nsv1036081	chr15:50818569-51097229	Strong transcription Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
21	nsv1055112	chr15:50822035-51133186	Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	46 gene(s)	inside rSNPs	diseases
22	nsv1042372	chr15:50846461-51208891	Strong transcription Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	63 gene(s)	inside rSNPs	diseases
23	nsv542386	chr15:50846461-51208891	Enhancers Active TSS Weak transcription Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	63 gene(s)	inside rSNPs	diseases
24	nsv569399	chr15:50874964-51562198	Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Strong transcription Enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	70 gene(s)	inside rSNPs	diseases
25	nsv569400	chr15:50874964-51767265	ZNF genes & repeats Weak transcription Strong transcription Active TSS Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	80 gene(s)	inside rSNPs	diseases
26	nsv1051400	chr15:50890333-51046283	Weak transcription Active TSS Enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	26 gene(s)	inside rSNPs	diseases
27	nsv904212	chr15:50979738-51132170	Strong transcription Enhancers Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:106 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:50979800-51014000	Weak transcription	Right Ventricle	heart
2	chr15:50980200-51006600	Weak transcription	Fetal Stomach	stomach
3	chr15:50980400-51003800	Weak transcription	Fetal Intestine Small	intestine
4	chr15:50980400-51013600	Weak transcription	Fetal Lung	lung
5	chr15:50985000-51009000	Weak transcription	Primary T cells from cord blood	blood
6	chr15:50988000-51056800	Weak transcription	Esophagus	oesophagus
7	chr15:50988200-51021600	Weak transcription	Pancreas	Pancrea
8	chr15:50988400-51010800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
9	chr15:50989800-51011000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
10	chr15:50990000-51008800	Weak transcription	Stomach Smooth Muscle	stomach
11	chr15:50990000-51013600	Weak transcription	A549	lung
12	chr15:50990000-51015400	Weak transcription	NH-A	brain
13	chr15:50990000-51038800	Weak transcription	NHLF	lung
14	chr15:50990200-51021600	Weak transcription	Psoas Muscle	Psoas
15	chr15:50991200-51013200	Weak transcription	Lung	lung
16	chr15:50991600-51033600	Strong transcription	Monocytes-CD14+_RO01746	blood
17	chr15:50993200-51005000	Weak transcription	Sigmoid Colon	Sigmoid Colon
18	chr15:50994000-51003600	Weak transcription	Fetal Intestine Large	intestine
19	chr15:50994600-51011600	Weak transcription	Fetal Brain Female	brain
20	chr15:50994800-51010400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
21	chr15:50994800-51010800	Weak transcription	NHDF-Ad	bronchial
22	chr15:50995000-51026400	Weak transcription	Placenta Amnion	Placenta Amnion
23	chr15:50995400-51008800	Weak transcription	Osteobl	bone
24	chr15:50995400-51010800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
25	chr15:50995400-51011600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
26	chr15:50995400-51011800	Weak transcription	Primary hematopoietic stem cells	blood
27	chr15:50995400-51011800	Weak transcription	Muscle Satellite Cultured Cells	--
28	chr15:50995400-51012200	Weak transcription	Colon Smooth Muscle	Colon
29	chr15:50995400-51017800	Weak transcription	HUVEC	blood vessel
30	chr15:50995600-51011600	Weak transcription	HUES6 Cell Line	embryonic stem cell
31	chr15:50995600-51012000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
32	chr15:50995600-51013200	Weak transcription	Aorta	Aorta
33	chr15:50995600-51046000	Weak transcription	Small Intestine	intestine
34	chr15:50995800-51012000	Weak transcription	Cortex derived primary cultured neurospheres	brain
35	chr15:50995800-51013200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
36	chr15:50996000-51012800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
37	chr15:50996200-51011600	Weak transcription	Colonic Mucosa	Colon
38	chr15:50996400-51011600	Weak transcription	Fetal Kidney	kidney
39	chr15:50997000-51010000	Weak transcription	Brain Inferior Temporal Lobe	brain
40	chr15:50997000-51017200	Weak transcription	Brain Anterior Caudate	brain
41	chr15:50997000-51044800	Weak transcription	K562	blood
42	chr15:50997200-51011800	Weak transcription	Rectal Smooth Muscle	rectum
43	chr15:50997400-51025000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
44	chr15:50997600-51033600	Strong transcription	Primary monocytes fromperipheralblood	blood
45	chr15:50997800-51010400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
46	chr15:50998200-51026800	Weak transcription	HMEC	breast
47	chr15:50998400-51010600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
48	chr15:50998400-51010800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
49	chr15:50998600-51004400	Strong transcription	Placenta	Placenta
50	chr15:50998600-51011000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain

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