The 2.0 version of rSNPBase

Variant report

Variant rs11869553
Chromosome Location chr17:67526420-67526421
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:67497600-67530200 Weak transcription Gastric stomach
2 chr17:67498600-67535600 Weak transcription Stomach Mucosa stomach
3 chr17:67498600-67538800 Weak transcription Right Ventricle heart
4 chr17:67499000-67535000 Weak transcription Fetal Brain Male brain
5 chr17:67499000-67560200 Weak transcription Fetal Brain Female brain
6 chr17:67499800-67535200 Weak transcription Small Intestine intestine
7 chr17:67503000-67530200 Weak transcription H9 Cell Line embryonic stem cell
8 chr17:67504000-67545200 Strong transcription Primary neutrophils fromperipheralblood blood
9 chr17:67505600-67535000 Weak transcription Esophagus oesophagus
10 chr17:67508400-67527400 Weak transcription Brain Anterior Caudate brain
11 chr17:67511800-67543000 Strong transcription Primary T cells from cord blood blood
12 chr17:67512400-67556800 Weak transcription Fetal Heart heart
13 chr17:67513200-67544000 Strong transcription Primary monocytes fromperipheralblood blood
14 chr17:67513600-67550400 Strong transcription Monocytes-CD14+_RO01746 blood
15 chr17:67515800-67535200 Weak transcription Dnd41 blood
16 chr17:67516200-67548600 Weak transcription Brain Germinal Matrix brain
17 chr17:67517400-67535800 Weak transcription Left Ventricle heart
18 chr17:67517600-67529800 Weak transcription Primary T killer naive cells fromperipheralblood blood
19 chr17:67517600-67542800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
20 chr17:67517600-67546000 Weak transcription HepG2 liver
21 chr17:67518800-67537200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
22 chr17:67519600-67526600 Strong transcription Fetal Lung lung
23 chr17:67519600-67527800 Strong transcription Primary T helper cells PMA-I stimulated --
24 chr17:67519600-67528800 Strong transcription Fetal Thymus thymus
25 chr17:67519600-67534600 Strong transcription Rectal Mucosa Donor 29 rectum
26 chr17:67519800-67527400 Weak transcription Adipose Nuclei Adipose
27 chr17:67519800-67528800 Strong transcription HUES64 Cell Line embryonic stem cell
28 chr17:67519800-67529600 Weak transcription ES-WA7 Cell Line embryonic stem cell
29 chr17:67519800-67529600 Weak transcription Brain Angular Gyrus brain
30 chr17:67519800-67530000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
31 chr17:67519800-67539400 Weak transcription Brain Inferior Temporal Lobe brain
32 chr17:67519800-67539400 Weak transcription Colon Smooth Muscle Colon
33 chr17:67519800-67540400 Strong transcription Breast Myoepithelial Primary Cells Breast
34 chr17:67519800-67540600 Strong transcription Primary T helper cells fromperipheralblood blood
35 chr17:67519800-67541600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr17:67519800-67557000 Weak transcription Pancreas Pancrea
37 chr17:67520000-67529600 Weak transcription HUVEC blood vessel
38 chr17:67520000-67533800 Strong transcription Fetal Muscle Leg muscle
39 chr17:67520000-67535400 Weak transcription Pancreatic Islets Pancreatic Islet
40 chr17:67521400-67534400 Weak transcription Primary T helper naive cells from peripheral blood blood
41 chr17:67521600-67529400 Weak transcription iPS-15b Cell Line embryonic stem cell
42 chr17:67522000-67534800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
43 chr17:67522200-67528000 Strong transcription GM12878-XiMat blood
44 chr17:67522800-67534800 Weak transcription A549 lung
45 chr17:67523000-67529600 Weak transcription ES-I3 Cell Line embryonic stem cell
46 chr17:67523200-67533600 Weak transcription Psoas Muscle Psoas
47 chr17:67523400-67533600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
48 chr17:67523400-67534000 Weak transcription Primary hematopoietic stem cells short term culture blood
49 chr17:67523400-67536600 Strong transcription Skeletal Muscle Female skeletal muscle
50 chr17:67523600-67529400 Weak transcription HUES6 Cell Line embryonic stem cell

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Last update: Aug 31, 2015