The 2.0 version of rSNPBase

Variant report

Variant rs11874635
Chromosome Location chr18:25724075-25724076
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:25696200-25727800 Weak transcription HSMMtube muscle
2 chr18:25703800-25727600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
3 chr18:25703800-25730000 Weak transcription Aorta Aorta
4 chr18:25705000-25727800 Weak transcription Ovary ovary
5 chr18:25705200-25727400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
6 chr18:25709000-25724400 Weak transcription HUES64 Cell Line embryonic stem cell
7 chr18:25709400-25727600 Weak transcription A549 lung
8 chr18:25710200-25727600 Weak transcription HepG2 liver
9 chr18:25710400-25726400 Weak transcription HUES48 Cell Line embryonic stem cell
10 chr18:25710400-25726400 Weak transcription Fetal Brain Female brain
11 chr18:25710400-25727600 Weak transcription Brain Anterior Caudate brain
12 chr18:25710400-25727600 Weak transcription Brain Substantia Nigra brain
13 chr18:25710600-25725000 Weak transcription HUES6 Cell Line embryonic stem cell
14 chr18:25710600-25727400 Weak transcription Brain Inferior Temporal Lobe brain
15 chr18:25710600-25731000 Weak transcription iPS-20b Cell Line embryonic stem cell
16 chr18:25712600-25728400 Weak transcription Right Ventricle heart
17 chr18:25712600-25730000 Weak transcription Left Ventricle heart
18 chr18:25712800-25728400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr18:25713000-25725000 Weak transcription Liver Liver
20 chr18:25713000-25727400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
21 chr18:25713800-25724600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr18:25714800-25727600 Weak transcription ES-I3 Cell Line embryonic stem cell
23 chr18:25716400-25727400 Weak transcription HUVEC blood vessel
24 chr18:25716800-25730400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
25 chr18:25717600-25727600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr18:25717600-25753400 Weak transcription Dnd41 blood
27 chr18:25720000-25724200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
28 chr18:25720000-25725000 Weak transcription Osteobl bone
29 chr18:25720600-25725800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr18:25720600-25726000 Weak transcription Cortex derived primary cultured neurospheres brain
31 chr18:25720800-25730000 Weak transcription Fetal Kidney kidney
32 chr18:25721400-25730000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
33 chr18:25722000-25726600 Weak transcription Brain Angular Gyrus brain
34 chr18:25722200-25724800 Weak transcription Brain Cingulate Gyrus brain
35 chr18:25722200-25727600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr18:25722600-25727000 Weak transcription Muscle Satellite Cultured Cells --
37 chr18:25723200-25724800 Weak transcription NH-A brain
38 chr18:25723200-25725400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr18:25723400-25724400 Weak transcription HSMM muscle
40 chr18:25723600-25725000 Weak transcription Fetal Heart heart
41 chr18:25723800-25726400 Weak transcription iPS-18 Cell Line embryonic stem cell
42 chr18:25724000-25727200 Enhancers Brain Germinal Matrix brain
43 chr18:25724000-25732400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
44 chr18:25724000-25732800 Weak transcription Gastric stomach

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Last update: Aug 31, 2015