Variant report

Variant rs11878728
Chromosome Location chr19:52501160-52501161
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:52490400-52509800 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
2 chr19:52491000-52507600 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
3 chr19:52491800-52507600 ZNF genes & repeats Adipose Nuclei Adipose
4 chr19:52491800-52508000 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
5 chr19:52492000-52508000 ZNF genes & repeats Duodenum Mucosa Duodenum
6 chr19:52493600-52507800 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr19:52493600-52507800 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
8 chr19:52493800-52508200 ZNF genes & repeats Fetal Brain Female brain
9 chr19:52494000-52507600 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr19:52494200-52503600 ZNF genes & repeats Skeletal Muscle Female skeletal muscle
11 chr19:52494200-52504600 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
12 chr19:52494200-52505800 ZNF genes & repeats Brain Hippocampus Middle brain
13 chr19:52494200-52508800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr19:52494400-52504000 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr19:52494600-52503600 ZNF genes & repeats Dnd41 blood
16 chr19:52495200-52504200 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
17 chr19:52495200-52507600 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr19:52495400-52501800 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
19 chr19:52495400-52501800 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
20 chr19:52495400-52501800 ZNF genes & repeats Psoas Muscle Psoas
21 chr19:52495400-52506000 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
22 chr19:52495400-52507800 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr19:52495400-52507800 ZNF genes & repeats Primary hematopoietic stem cells blood
24 chr19:52495400-52507800 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
25 chr19:52495400-52508200 ZNF genes & repeats Liver Liver
26 chr19:52495600-52502600 ZNF genes & repeats Primary T helper naive cells from peripheral blood blood
27 chr19:52495600-52502600 ZNF genes & repeats Brain Anterior Caudate brain
28 chr19:52495600-52503600 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr19:52495600-52504000 ZNF genes & repeats Osteobl bone
30 chr19:52495600-52505800 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
31 chr19:52495600-52507200 ZNF genes & repeats Brain Cingulate Gyrus brain
32 chr19:52495600-52507800 ZNF genes & repeats Brain Inferior Temporal Lobe brain
33 chr19:52495800-52504200 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
34 chr19:52495800-52504600 ZNF genes & repeats Fetal Muscle Trunk muscle
35 chr19:52495800-52506600 ZNF genes & repeats Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr19:52495800-52507400 ZNF genes & repeats Primary T helper memory cells from peripheral blood 1 blood
37 chr19:52495800-52508000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr19:52495800-52508000 ZNF genes & repeats A549 lung
39 chr19:52496000-52502200 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
40 chr19:52496000-52502200 ZNF genes & repeats Left Ventricle heart
41 chr19:52496000-52503600 ZNF genes & repeats H1 Cell Line embryonic stem cell
42 chr19:52496000-52503800 ZNF genes & repeats Stomach Smooth Muscle stomach
43 chr19:52496000-52504200 ZNF genes & repeats Brain Angular Gyrus brain
44 chr19:52496000-52504200 ZNF genes & repeats Skeletal Muscle Male skeletal muscle
45 chr19:52496000-52504600 ZNF genes & repeats Colon Smooth Muscle Colon
46 chr19:52496000-52505000 ZNF genes & repeats Fetal Adrenal Gland Adrenal Gland
47 chr19:52496000-52507400 ZNF genes & repeats Rectal Mucosa Donor 29 rectum
48 chr19:52496000-52507600 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
49 chr19:52496000-52507600 ZNF genes & repeats Fetal Kidney kidney
50 chr19:52496000-52508000 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood

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