The 2.0 version of rSNPBase

Variant report

Variant rs11888722
Chromosome Location chr2:190645932-190645933
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:190627800-190648200 Weak transcription Gastric stomach
2 chr2:190628200-190648000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr2:190628200-190648000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr2:190628200-190648200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr2:190628400-190648000 Weak transcription ES-WA7 Cell Line embryonic stem cell
6 chr2:190628600-190647000 Weak transcription iPS-15b Cell Line embryonic stem cell
7 chr2:190628600-190647200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
8 chr2:190628600-190647200 Weak transcription Stomach Mucosa stomach
9 chr2:190628600-190648400 Weak transcription Small Intestine intestine
10 chr2:190629000-190647200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr2:190629800-190647000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr2:190630000-190646600 Strong transcription Primary hematopoietic stem cells short term culture blood
13 chr2:190630800-190647000 Strong transcription HSMM muscle
14 chr2:190631000-190646200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
15 chr2:190631200-190646200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr2:190631200-190647200 Strong transcription Fetal Thymus thymus
17 chr2:190631400-190646000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr2:190631400-190646000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr2:190631400-190646800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
20 chr2:190631600-190646200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr2:190631600-190647000 Strong transcription HUES64 Cell Line embryonic stem cell
22 chr2:190632000-190646600 Strong transcription Placenta Placenta
23 chr2:190632800-190647200 Strong transcription Primary B cells from peripheral blood blood
24 chr2:190633200-190646200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
25 chr2:190633200-190646800 Strong transcription HMEC breast
26 chr2:190633600-190646600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr2:190634000-190646400 Strong transcription Rectal Mucosa Donor 29 rectum
28 chr2:190634000-190647000 Strong transcription Osteobl bone
29 chr2:190634200-190647400 Strong transcription Fetal Muscle Trunk muscle
30 chr2:190634600-190646200 Strong transcription Primary hematopoietic stem cells blood
31 chr2:190634600-190646400 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
32 chr2:190634600-190646600 Strong transcription Muscle Satellite Cultured Cells --
33 chr2:190634600-190647000 Strong transcription NH-A brain
34 chr2:190634600-190647200 Strong transcription H1 Cell Line embryonic stem cell
35 chr2:190634600-190647200 Strong transcription HUES48 Cell Line embryonic stem cell
36 chr2:190634600-190647200 Strong transcription iPS-20b Cell Line embryonic stem cell
37 chr2:190635000-190647000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr2:190635000-190647200 Strong transcription iPS-18 Cell Line embryonic stem cell
39 chr2:190635200-190646400 Strong transcription Duodenum Mucosa Duodenum
40 chr2:190635200-190647200 Strong transcription HUES6 Cell Line embryonic stem cell
41 chr2:190636200-190646800 Strong transcription Skeletal Muscle Female skeletal muscle
42 chr2:190636400-190647000 Weak transcription Aorta Aorta
43 chr2:190637000-190646400 Strong transcription Fetal Lung lung
44 chr2:190638200-190647000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr2:190638400-190646000 Strong transcription HepG2 liver
46 chr2:190638600-190646000 Strong transcription Primary neutrophils fromperipheralblood blood
47 chr2:190638800-190646200 Strong transcription Cortex derived primary cultured neurospheres brain
48 chr2:190640200-190647200 Weak transcription Placenta Amnion Placenta Amnion
49 chr2:190641200-190646000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
50 chr2:190641200-190647000 Weak transcription Rectal Smooth Muscle rectum

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Last update: Aug 31, 2015