The 2.0 version of rSNPBase

Variant report

Variant rs5743205
Chromosome Location chr2:190742852-190742853
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:89 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:190658200-190743800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr2:190659800-190743600 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr2:190669400-190743800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
4 chr2:190681000-190743000 Weak transcription Brain Germinal Matrix brain
5 chr2:190684000-190743600 Weak transcription Brain Inferior Temporal Lobe brain
6 chr2:190691000-190744200 Weak transcription ES-I3 Cell Line embryonic stem cell
7 chr2:190701200-190743200 Weak transcription Fetal Brain Male brain
8 chr2:190701400-190744000 Weak transcription Fetal Brain Female brain
9 chr2:190701600-190743200 Weak transcription Stomach Smooth Muscle stomach
10 chr2:190701600-190744800 Weak transcription Rectal Smooth Muscle rectum
11 chr2:190701800-190745200 Weak transcription Fetal Kidney kidney
12 chr2:190702400-190745600 Weak transcription Colon Smooth Muscle Colon
13 chr2:190707600-190746000 Weak transcription Left Ventricle heart
14 chr2:190708400-190743400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
15 chr2:190708800-190744400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
16 chr2:190709600-190744000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr2:190713200-190743400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
18 chr2:190713200-190743800 Weak transcription Fetal Adrenal Gland Adrenal Gland
19 chr2:190713200-190745600 Weak transcription Pancreas Pancrea
20 chr2:190713800-190743800 Weak transcription Fetal Intestine Large intestine
21 chr2:190713800-190744400 Weak transcription Gastric stomach
22 chr2:190713800-190744800 Weak transcription K562 blood
23 chr2:190714600-190743800 Weak transcription Rectal Mucosa Donor 29 rectum
24 chr2:190714600-190744000 Weak transcription Fetal Stomach stomach
25 chr2:190714600-190744400 Weak transcription Psoas Muscle Psoas
26 chr2:190714800-190745200 Weak transcription NHEK skin
27 chr2:190715600-190744800 Weak transcription Skeletal Muscle Female skeletal muscle
28 chr2:190716000-190743400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr2:190716600-190743400 Weak transcription Skeletal Muscle Male skeletal muscle
30 chr2:190716600-190744200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
31 chr2:190716800-190744200 Weak transcription iPS-15b Cell Line embryonic stem cell
32 chr2:190718600-190743000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
33 chr2:190718600-190745800 Weak transcription Fetal Intestine Small intestine
34 chr2:190719800-190743600 Weak transcription Primary T regulatory cells fromperipheralblood blood
35 chr2:190719800-190743800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr2:190720000-190743400 Weak transcription Duodenum Mucosa Duodenum
37 chr2:190720000-190744000 Weak transcription H1 Cell Line embryonic stem cell
38 chr2:190720000-190744000 Weak transcription NH-A brain
39 chr2:190722200-190745600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
40 chr2:190725200-190746000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr2:190729000-190745200 Weak transcription HUVEC blood vessel
42 chr2:190729200-190743800 Weak transcription Fetal Thymus thymus
43 chr2:190729600-190743200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
44 chr2:190729800-190745800 Weak transcription Thymus Thymus
45 chr2:190730400-190744200 Weak transcription Esophagus oesophagus
46 chr2:190730800-190744800 Weak transcription NHLF lung
47 chr2:190731600-190745200 Weak transcription NHDF-Ad bronchial
48 chr2:190732000-190744800 Weak transcription HepG2 liver
49 chr2:190732200-190744800 Weak transcription A549 lung
50 chr2:190732800-190745800 Weak transcription Fetal Lung lung

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015