The 2.0 version of rSNPBase

Variant report

Variant rs2118454
Chromosome Location chr2:190543057-190543058
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:190534000-190550200 Weak transcription K562 blood
2 chr2:190539600-190543400 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
3 chr2:190539800-190550200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr2:190539800-190550200 Weak transcription Esophagus oesophagus
5 chr2:190539800-190550200 Weak transcription Small Intestine intestine
6 chr2:190540000-190546000 Weak transcription Gastric stomach
7 chr2:190540000-190546000 Weak transcription Left Ventricle heart
8 chr2:190540000-190546000 Weak transcription Ovary ovary
9 chr2:190540000-190550200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
10 chr2:190540000-190550200 Weak transcription Fetal Thymus thymus
11 chr2:190540000-190550400 Weak transcription Fetal Kidney kidney
12 chr2:190540000-190563400 Weak transcription Aorta Aorta
13 chr2:190540200-190546600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
14 chr2:190540200-190547800 Weak transcription HMEC breast
15 chr2:190540200-190550200 Weak transcription Right Atrium heart
16 chr2:190540200-190550200 Weak transcription Right Ventricle heart
17 chr2:190540200-190578000 Weak transcription Fetal Brain Male brain
18 chr2:190540400-190543200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
19 chr2:190540400-190544600 Weak transcription NH-A brain
20 chr2:190540400-190546000 Weak transcription Spleen Spleen
21 chr2:190540400-190550200 Weak transcription Muscle Satellite Cultured Cells --
22 chr2:190540400-190550200 Weak transcription Fetal Stomach stomach
23 chr2:190540400-190550200 Weak transcription Rectal Mucosa Donor 31 rectum
24 chr2:190540400-190550200 Weak transcription HSMMtube muscle
25 chr2:190540400-190550200 Weak transcription NHLF lung
26 chr2:190540400-190550400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
27 chr2:190540400-190550400 Weak transcription HSMM muscle
28 chr2:190540400-190558400 Weak transcription Fetal Intestine Small intestine
29 chr2:190540400-190564200 Weak transcription Placenta Placenta
30 chr2:190540400-190572000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
31 chr2:190540400-190576400 Weak transcription Fetal Muscle Trunk muscle
32 chr2:190540600-190544600 Weak transcription Fetal Heart heart
33 chr2:190540600-190545400 Weak transcription Primary T regulatory cells fromperipheralblood blood
34 chr2:190540600-190545800 Weak transcription Primary T cells from cord blood blood
35 chr2:190540600-190549800 Weak transcription Primary hematopoietic stem cells blood
36 chr2:190540600-190550200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
37 chr2:190540600-190550200 Weak transcription Primary T killer naive cells fromperipheralblood blood
38 chr2:190540600-190550200 Weak transcription Cortex derived primary cultured neurospheres brain
39 chr2:190540600-190550200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
40 chr2:190540600-190550200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
41 chr2:190540600-190550200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr2:190540800-190544000 Weak transcription Primary B cells from cord blood blood
43 chr2:190540800-190544000 Weak transcription Primary B cells from peripheral blood blood
44 chr2:190540800-190546000 Weak transcription Lung lung
45 chr2:190540800-190547600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr2:190540800-190549600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
47 chr2:190540800-190549800 Weak transcription Primary T helper naive cells fromperipheralblood blood
48 chr2:190540800-190550200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
49 chr2:190540800-190550200 Weak transcription Primary T helper cells fromperipheralblood blood
50 chr2:190540800-190550400 Weak transcription Primary Natural Killer cells fromperipheralblood blood

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Last update: Aug 31, 2015