Variant report

Variant	rs59937732
Chromosome Location	chr2:190925313-190925314
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs1987296	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs55777905	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs5743205	1.00[AMR][1000 genomes]
rs60490864	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7599727	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3439178	chr2:190877215-191124499	Enhancers Weak transcription ZNF genes & repeats Active TSS Strong transcription Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:190924000-190927600	Active TSS	Fetal Muscle Trunk	muscle
2	chr2:190924400-190927200	Active TSS	Muscle Satellite Cultured Cells	--
3	chr2:190924400-190927800	Active TSS	HSMMtube	muscle
4	chr2:190924600-190927600	Active TSS	Skeletal Muscle Female	skeletal muscle
5	chr2:190924800-190927600	Active TSS	Fetal Muscle Leg	muscle
6	chr2:190925000-190926800	Weak transcription	Brain Substantia Nigra	brain
7	chr2:190925000-190927600	Active TSS	Skeletal Muscle Male	skeletal muscle
8	chr2:190925000-190927600	Active TSS	HSMM	muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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