The 2.0 version of rSNPBase

Variant report

Variant rs11899966
Chromosome Location chr2:128150922-128150923
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:128146000-128158400 Weak transcription Ovary ovary
2 chr2:128146400-128155200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr2:128146400-128165200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr2:128146600-128152000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr2:128146600-128152000 Weak transcription Cortex derived primary cultured neurospheres brain
6 chr2:128146600-128154200 Weak transcription Brain Germinal Matrix brain
7 chr2:128146600-128155000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr2:128146600-128155000 Weak transcription Placenta Amnion Placenta Amnion
9 chr2:128146600-128155200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
10 chr2:128146600-128155200 Weak transcription Esophagus oesophagus
11 chr2:128146600-128155400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
12 chr2:128146600-128155400 Weak transcription Brain Hippocampus Middle brain
13 chr2:128146600-128155400 Weak transcription Brain Substantia Nigra brain
14 chr2:128146600-128155400 Weak transcription Placenta Placenta
15 chr2:128146600-128155400 Weak transcription Spleen Spleen
16 chr2:128146600-128155600 Weak transcription Brain Anterior Caudate brain
17 chr2:128146600-128155600 Weak transcription Colonic Mucosa Colon
18 chr2:128146600-128157200 Weak transcription Fetal Stomach stomach
19 chr2:128146600-128162600 Weak transcription H1 Cell Line embryonic stem cell
20 chr2:128146800-128151800 Weak transcription ES-I3 Cell Line embryonic stem cell
21 chr2:128146800-128151800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
22 chr2:128146800-128158200 Weak transcription Small Intestine intestine
23 chr2:128147000-128155000 Weak transcription Skeletal Muscle Male skeletal muscle
24 chr2:128148000-128154000 Weak transcription Primary T cells from cord blood blood
25 chr2:128148600-128155000 Weak transcription Skeletal Muscle Female skeletal muscle
26 chr2:128148600-128155200 Weak transcription Monocytes-CD14+_RO01746 blood
27 chr2:128148800-128152000 Weak transcription Liver Liver
28 chr2:128148800-128155200 Weak transcription GM12878-XiMat blood
29 chr2:128148800-128155400 Weak transcription HepG2 liver
30 chr2:128149000-128155200 Weak transcription Fetal Intestine Large intestine
31 chr2:128149600-128151000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr2:128149600-128151000 Enhancers Muscle Satellite Cultured Cells --
33 chr2:128149600-128151000 Enhancers NH-A brain
34 chr2:128149800-128151000 Enhancers Osteobl bone
35 chr2:128149800-128151200 Weak transcription Primary B cells from cord blood blood
36 chr2:128150200-128151000 Weak transcription Primary monocytes fromperipheralblood blood
37 chr2:128150200-128151000 Enhancers Thymus Thymus
38 chr2:128150200-128151000 Enhancers Hela-S3 cervix
39 chr2:128150200-128151000 Enhancers HMEC breast
40 chr2:128150200-128151000 Flanking Active TSS K562 blood
41 chr2:128150200-128155400 Weak transcription HUES6 Cell Line embryonic stem cell
42 chr2:128150400-128151000 Enhancers Aorta Aorta
43 chr2:128150400-128151800 Weak transcription Primary B cells from peripheral blood blood
44 chr2:128150400-128155200 Weak transcription HSMM muscle
45 chr2:128150400-128165000 Weak transcription HUES64 Cell Line embryonic stem cell
46 chr2:128150600-128151000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr2:128150600-128151400 Strong transcription Primary hematopoietic stem cells blood
48 chr2:128150600-128155200 Weak transcription HSMMtube muscle
49 chr2:128150600-128155400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr2:128150600-128158200 Weak transcription Fetal Thymus thymus

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Last update: Aug 31, 2015