Variant report
| Variant | rs1190800 |
|---|---|
| Chromosome Location | chr6:131511553-131511554 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:131457600-131520800 | Weak transcription | Right Ventricle | heart |
| 2 | chr6:131458200-131513400 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 3 | chr6:131485600-131514000 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 4 | chr6:131487000-131512800 | Weak transcription | Brain Hippocampus Middle | brain |
| 5 | chr6:131488200-131534800 | Weak transcription | Gastric | stomach |
| 6 | chr6:131489000-131513000 | Weak transcription | Colon Smooth Muscle | Colon |
| 7 | chr6:131494800-131514000 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 8 | chr6:131504200-131514000 | Weak transcription | Brain Germinal Matrix | brain |
| 9 | chr6:131504600-131512800 | Weak transcription | Brain Angular Gyrus | brain |
| 10 | chr6:131505000-131512000 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 11 | chr6:131505000-131518800 | Weak transcription | Thymus | Thymus |
| 12 | chr6:131505000-131521000 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 13 | chr6:131505000-131521800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 14 | chr6:131505200-131512800 | Weak transcription | Aorta | Aorta |
| 15 | chr6:131505200-131513400 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 16 | chr6:131505200-131522600 | Weak transcription | HSMMtube | muscle |
| 17 | chr6:131505800-131534600 | Weak transcription | Brain Substantia Nigra | brain |
| 18 | chr6:131505800-131534800 | Weak transcription | Pancreas | Pancrea |
| 19 | chr6:131506000-131515800 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 20 | chr6:131506200-131512800 | Weak transcription | Left Ventricle | heart |
| 21 | chr6:131506400-131512600 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 22 | chr6:131506400-131512800 | Weak transcription | Brain Cingulate Gyrus | brain |
| 23 | chr6:131506400-131512800 | Weak transcription | Placenta | Placenta |
| 24 | chr6:131506400-131512800 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 25 | chr6:131506400-131520800 | Weak transcription | Duodenum Mucosa | Duodenum |
| 26 | chr6:131506600-131512800 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 27 | chr6:131506600-131512800 | Weak transcription | Esophagus | oesophagus |
| 28 | chr6:131506600-131512800 | Weak transcription | Fetal Intestine Small | intestine |
| 29 | chr6:131506600-131512800 | Weak transcription | Fetal Muscle Leg | muscle |
| 30 | chr6:131506600-131512800 | Weak transcription | Fetal Stomach | stomach |
| 31 | chr6:131506600-131514200 | Weak transcription | Stomach Smooth Muscle | stomach |
| 32 | chr6:131506600-131520600 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 33 | chr6:131506600-131520600 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 34 | chr6:131506600-131520600 | Weak transcription | Spleen | Spleen |
| 35 | chr6:131506600-131520800 | Weak transcription | Lung | lung |
| 36 | chr6:131506600-131523800 | Weak transcription | HepG2 | liver |
| 37 | chr6:131506600-131524000 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 38 | chr6:131506600-131529800 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 39 | chr6:131506600-131532000 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 40 | chr6:131506800-131512000 | Weak transcription | Adipose Nuclei | Adipose |
| 41 | chr6:131506800-131512600 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 42 | chr6:131506800-131512600 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 43 | chr6:131506800-131512800 | Weak transcription | Brain Anterior Caudate | brain |
| 44 | chr6:131506800-131512800 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 45 | chr6:131506800-131512800 | Weak transcription | Fetal Muscle Trunk | muscle |
| 46 | chr6:131506800-131514200 | Weak transcription | Dnd41 | blood |
| 47 | chr6:131506800-131518600 | Weak transcription | Primary B cells from cord blood | blood |
| 48 | chr6:131506800-131551800 | Weak transcription | Ovary | ovary |
| 49 | chr6:131507000-131520400 | Weak transcription | Liver | Liver |
| 50 | chr6:131507200-131512600 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
