Variant report

Variant rs1729549
Chromosome Location chr6:131506165-131506166
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:131457600-131520800 Weak transcription Right Ventricle heart
2 chr6:131458200-131513400 Weak transcription Primary hematopoietic stem cells short term culture blood
3 chr6:131483000-131506200 Weak transcription Primary monocytes fromperipheralblood blood
4 chr6:131484400-131509200 Weak transcription Rectal Smooth Muscle rectum
5 chr6:131485400-131509600 Weak transcription Small Intestine intestine
6 chr6:131485600-131514000 Weak transcription Rectal Mucosa Donor 29 rectum
7 chr6:131487000-131512800 Weak transcription Brain Hippocampus Middle brain
8 chr6:131488200-131534800 Weak transcription Gastric stomach
9 chr6:131489000-131513000 Weak transcription Colon Smooth Muscle Colon
10 chr6:131491200-131508000 Weak transcription Monocytes-CD14+_RO01746 blood
11 chr6:131493800-131506600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr6:131494800-131514000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr6:131496600-131507200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr6:131504200-131514000 Weak transcription Brain Germinal Matrix brain
15 chr6:131504400-131506600 Strong transcription Fetal Stomach stomach
16 chr6:131504600-131506600 Strong transcription Fetal Intestine Small intestine
17 chr6:131504600-131507000 Weak transcription Rectal Mucosa Donor 31 rectum
18 chr6:131504600-131507000 Weak transcription NHLF lung
19 chr6:131504600-131512800 Weak transcription Brain Angular Gyrus brain
20 chr6:131504800-131506600 Strong transcription Fetal Muscle Leg muscle
21 chr6:131504800-131506600 Strong transcription Stomach Smooth Muscle stomach
22 chr6:131504800-131506800 Strong transcription Duodenum Smooth Muscle Duodenum
23 chr6:131504800-131506800 Strong transcription Fetal Adrenal Gland Adrenal Gland
24 chr6:131504800-131507000 Strong transcription Liver Liver
25 chr6:131504800-131508000 Strong transcription Breast Myoepithelial Primary Cells Breast
26 chr6:131505000-131506200 Weak transcription Primary B cells from cord blood blood
27 chr6:131505000-131506400 Strong transcription Placenta Placenta
28 chr6:131505000-131506600 Strong transcription Spleen Spleen
29 chr6:131505000-131506800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr6:131505000-131506800 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
31 chr6:131505000-131506800 Strong transcription Adipose Nuclei Adipose
32 chr6:131505000-131508800 Weak transcription iPS-15b Cell Line embryonic stem cell
33 chr6:131505000-131512000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr6:131505000-131518800 Weak transcription Thymus Thymus
35 chr6:131505000-131521000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
36 chr6:131505000-131521800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr6:131505200-131506200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
38 chr6:131505200-131506400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr6:131505200-131506400 Strong transcription Fetal Intestine Large intestine
40 chr6:131505200-131506600 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr6:131505200-131506600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
42 chr6:131505200-131506800 Weak transcription Cortex derived primary cultured neurospheres brain
43 chr6:131505200-131507200 Weak transcription HUES64 Cell Line embryonic stem cell
44 chr6:131505200-131507200 Strong transcription Skeletal Muscle Female skeletal muscle
45 chr6:131505200-131507400 Weak transcription H1 Cell Line embryonic stem cell
46 chr6:131505200-131507400 Weak transcription HUES6 Cell Line embryonic stem cell
47 chr6:131505200-131507400 Strong transcription Fetal Lung lung
48 chr6:131505200-131512800 Weak transcription Aorta Aorta
49 chr6:131505200-131513400 Weak transcription Primary T helper naive cells fromperipheralblood blood
50 chr6:131505200-131522600 Weak transcription HSMMtube muscle

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