Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs11915075	1.00[ASN][1000 genomes]
rs13068053	1.00[ASN][1000 genomes]
rs13324837	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1454265	1.00[ASN][1000 genomes]
rs28729280	1.00[ASN][1000 genomes]
rs35507461	1.00[ASN][1000 genomes]
rs35868610	1.00[ASN][1000 genomes]
rs56757842	1.00[ASN][1000 genomes]
rs58620671	0.97[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59020662	1.00[ASN][1000 genomes]
rs6768918	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6790295	1.00[ASN][1000 genomes]
rs73115805	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73118693	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73126649	0.87[AFR][1000 genomes];0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73138243	1.00[ASN][1000 genomes]
rs7645586	0.81[AFR][1000 genomes];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9813850	1.00[ASN][1000 genomes]
rs9853565	1.00[ASN][1000 genomes]
rs9863575	1.00[ASN][1000 genomes]
rs9864451	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1013820	chr3:82175705-82968181	Flanking Active TSS Enhancers Weak transcription Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:82522600-82524800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
2	chr3:82523000-82524200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
3	chr3:82523000-82524600	Enhancers	Muscle Satellite Cultured Cells	--
4	chr3:82523000-82524800	Enhancers	Hela-S3	cervix
5	chr3:82523000-82524800	Enhancers	HMEC	breast
6	chr3:82523200-82524400	Enhancers	NHEK	skin
7	chr3:82523200-82524600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
8	chr3:82523200-82524600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin

Quick Search: