Variant report
| Variant | rs11946622 |
|---|---|
| Chromosome Location | chr4:152486018-152486019 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr4:152475600-152486800 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 2 | chr4:152476600-152494800 | Weak transcription | HMEC | breast |
| 3 | chr4:152476600-152526600 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 4 | chr4:152477600-152487000 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 5 | chr4:152477600-152494400 | Weak transcription | NHEK | skin |
| 6 | chr4:152483200-152487400 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 7 | chr4:152483600-152486200 | Weak transcription | Small Intestine | intestine |
| 8 | chr4:152484400-152486800 | Enhancers | Fetal Intestine Small | intestine |
| 9 | chr4:152484400-152487600 | Enhancers | Stomach Mucosa | stomach |
| 10 | chr4:152484400-152488800 | Enhancers | Fetal Intestine Large | intestine |
| 11 | chr4:152484600-152486200 | Active TSS | Rectal Mucosa Donor 29 | rectum |
| 12 | chr4:152484800-152487400 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 13 | chr4:152484800-152490800 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 14 | chr4:152484800-152518600 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 15 | chr4:152485000-152487400 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 16 | chr4:152485200-152487400 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 17 | chr4:152485200-152496400 | Weak transcription | Colonic Mucosa | Colon |
| 18 | chr4:152485600-152486200 | Enhancers | Ovary | ovary |
| 19 | chr4:152485600-152509600 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 20 | chr4:152485800-152486200 | Flanking Active TSS | Rectal Mucosa Donor 31 | rectum |
| 21 | chr4:152485800-152489200 | Weak transcription | Psoas Muscle | Psoas |
| 22 | chr4:152485800-152490200 | Weak transcription | Pancreas | Pancrea |
| 23 | chr4:152485800-152495000 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 24 | chr4:152485800-152498800 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 25 | chr4:152486000-152486200 | Flanking Active TSS | Duodenum Mucosa | Duodenum |
