Variant report

Variant	rs11947846
Chromosome Location	chr4:127991468-127991469
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs11932855	1.00[AMR][1000 genomes]
rs11941015	1.00[AMR][1000 genomes]
rs72923268	1.00[AMR][1000 genomes]
rs72923277	1.00[AMR][1000 genomes]
rs72923281	1.00[AMR][1000 genomes]
rs72923284	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830055	chr4:127794875-127993821	Weak transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:127989200-127991600	Enhancers	H1 Cell Line	embryonic stem cell
2	chr4:127990600-127993400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr4:127991000-127991800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
4	chr4:127991000-127991800	Enhancers	Aorta	Aorta

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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