Variant report

Variant	rs72923281
Chromosome Location	chr4:127927415-127927416
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs11932855	1.00[AMR][1000 genomes]
rs11941015	1.00[AMR][1000 genomes]
rs11947846	1.00[AMR][1000 genomes]
rs17011675	1.00[AMR][1000 genomes]
rs72923252	1.00[AMR][1000 genomes]
rs72923254	1.00[AMR][1000 genomes]
rs72923260	1.00[AMR][1000 genomes]
rs72923261	1.00[AMR][1000 genomes]
rs72923268	1.00[AMR][1000 genomes]
rs72923277	1.00[AMR][1000 genomes]
rs72923284	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830055	chr4:127794875-127993821	Weak transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv879913	chr4:127844803-127948196	Weak transcription Enhancers Genic enhancers Active TSS Strong transcription ZNF genes & repeats Flanking Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:127926600-127929200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr4:127927000-127928200	Enhancers	Brain Germinal Matrix	brain
3	chr4:127927200-127928000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr4:127927400-127927600	Weak transcription	Fetal Brain Male	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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