Variant report

Variant rs11972247
Chromosome Location chr7:64448291-64448292
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:64433400-64465600 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr7:64436400-64454200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr7:64436800-64454200 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
4 chr7:64437000-64449600 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
5 chr7:64438600-64465200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
6 chr7:64438800-64454400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
7 chr7:64440200-64457600 Weak transcription Pancreas Pancrea
8 chr7:64440600-64452000 Weak transcription Rectal Smooth Muscle rectum
9 chr7:64441600-64450200 Weak transcription Primary T helper naive cells fromperipheralblood blood
10 chr7:64441800-64450600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr7:64441800-64450600 Weak transcription Brain Substantia Nigra brain
12 chr7:64441800-64453200 Weak transcription Brain Inferior Temporal Lobe brain
13 chr7:64441800-64456800 Weak transcription Fetal Heart heart
14 chr7:64441800-64459400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
15 chr7:64441800-64465000 Weak transcription Brain Angular Gyrus brain
16 chr7:64442000-64452800 Weak transcription Stomach Smooth Muscle stomach
17 chr7:64442000-64453600 Weak transcription Fetal Kidney kidney
18 chr7:64442000-64457600 Weak transcription Skeletal Muscle Male skeletal muscle
19 chr7:64442600-64453200 Weak transcription Placenta Amnion Placenta Amnion
20 chr7:64442600-64453600 Weak transcription Muscle Satellite Cultured Cells --
21 chr7:64442800-64448800 Weak transcription Brain Anterior Caudate brain
22 chr7:64443000-64449000 Weak transcription Brain Hippocampus Middle brain
23 chr7:64443000-64452200 Weak transcription Skeletal Muscle Female skeletal muscle
24 chr7:64443800-64457200 Weak transcription Right Ventricle heart
25 chr7:64444000-64448400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
26 chr7:64444200-64454200 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
27 chr7:64444600-64450400 Weak transcription HSMMtube muscle
28 chr7:64444800-64450200 Weak transcription Fetal Adrenal Gland Adrenal Gland
29 chr7:64444800-64452400 Weak transcription Ovary ovary
30 chr7:64445400-64452000 Weak transcription Esophagus oesophagus
31 chr7:64445600-64450200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr7:64445800-64450600 Weak transcription Adipose Nuclei Adipose
33 chr7:64446000-64460000 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
34 chr7:64446200-64450600 Weak transcription Fetal Stomach stomach
35 chr7:64446400-64450200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr7:64446400-64452200 Weak transcription Left Ventricle heart
37 chr7:64447000-64449200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
38 chr7:64447000-64450200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
39 chr7:64447200-64448800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr7:64447600-64448400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr7:64447600-64448800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr7:64447600-64448800 Weak transcription Brain Germinal Matrix brain
43 chr7:64447600-64453000 Weak transcription HSMM muscle
44 chr7:64447800-64449400 ZNF genes & repeats HepG2 liver
45 chr7:64447800-64450000 Weak transcription Cortex derived primary cultured neurospheres brain
46 chr7:64448000-64449200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr7:64448200-64449400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
48 chr7:64448200-64450000 Weak transcription Placenta Placenta

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