The 2.0 version of rSNPBase

Variant report

Variant rs11987441
Chromosome Location chr8:59987196-59987197
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:59957800-59989800 Weak transcription Duodenum Smooth Muscle Duodenum
2 chr8:59969600-59995400 Weak transcription Osteobl bone
3 chr8:59978000-59995600 Weak transcription Duodenum Mucosa Duodenum
4 chr8:59978200-59991000 Weak transcription HUVEC blood vessel
5 chr8:59978600-59988600 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr8:59979000-59987800 Weak transcription Primary hematopoietic stem cells blood
7 chr8:59979200-59996400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr8:59979600-59987400 Weak transcription Primary hematopoietic stem cells short term culture blood
9 chr8:59979600-59989800 Weak transcription Colon Smooth Muscle Colon
10 chr8:59979600-59990800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
11 chr8:59979800-59988600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr8:59979800-59990400 Weak transcription H1 Cell Line embryonic stem cell
13 chr8:59980200-59990400 Weak transcription Fetal Stomach stomach
14 chr8:59980600-59990600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
15 chr8:59981600-59989600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
16 chr8:59981600-59989600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr8:59981600-59992000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr8:59981800-59988600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
19 chr8:59981800-59992200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
20 chr8:59982000-59987400 Weak transcription Cortex derived primary cultured neurospheres brain
21 chr8:59982000-59987400 Weak transcription Thymus Thymus
22 chr8:59982200-59987800 Weak transcription Gastric stomach
23 chr8:59982400-59991800 Weak transcription Primary T helper cells fromperipheralblood blood
24 chr8:59984400-60019000 Weak transcription Rectal Mucosa Donor 29 rectum
25 chr8:59984800-59989600 Weak transcription Muscle Satellite Cultured Cells --
26 chr8:59985200-59987800 Weak transcription Primary T regulatory cells fromperipheralblood blood
27 chr8:59985200-60002000 Weak transcription Small Intestine intestine
28 chr8:59985800-59995400 Weak transcription Pancreatic Islets Pancreatic Islet
29 chr8:59986200-59988600 Weak transcription HUES64 Cell Line embryonic stem cell
30 chr8:59986200-59989800 Weak transcription HUES6 Cell Line embryonic stem cell
31 chr8:59986200-59994200 Weak transcription ES-WA7 Cell Line embryonic stem cell
32 chr8:59986400-59987800 Weak transcription iPS-18 Cell Line embryonic stem cell
33 chr8:59986600-59987800 Weak transcription Primary T cells from cord blood blood
34 chr8:59986600-59988000 Strong transcription Fetal Thymus thymus
35 chr8:59986600-59989600 Weak transcription ES-I3 Cell Line embryonic stem cell
36 chr8:59986800-59987200 Weak transcription iPS-15b Cell Line embryonic stem cell
37 chr8:59987000-59987600 Weak transcription iPS-20b Cell Line embryonic stem cell
38 chr8:59987000-59987800 Genic enhancers Dnd41 blood
39 chr8:59987000-59989800 Weak transcription HUES48 Cell Line embryonic stem cell

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Last update: Aug 31, 2015