The 2.0 version of rSNPBase

Variant report

Variant rs73254439
Chromosome Location chr8:59921171-59921172
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:59889800-59927000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
2 chr8:59902200-59924600 Weak transcription Primary hematopoietic stem cells blood
3 chr8:59905800-59924200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
4 chr8:59905800-59925400 Weak transcription Primary T helper cells PMA-I stimulated --
5 chr8:59906000-59924400 Weak transcription Primary T regulatory cells fromperipheralblood blood
6 chr8:59910200-59924400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr8:59916800-59928400 Weak transcription Duodenum Smooth Muscle Duodenum
8 chr8:59917200-59922600 Weak transcription Primary hematopoietic stem cells short term culture blood
9 chr8:59918000-59926800 Weak transcription Fetal Stomach stomach
10 chr8:59918200-59921200 Enhancers HUES48 Cell Line embryonic stem cell
11 chr8:59918400-59921400 Enhancers HUES64 Cell Line embryonic stem cell
12 chr8:59918600-59924800 Weak transcription Small Intestine intestine
13 chr8:59918800-59921800 Enhancers Cortex derived primary cultured neurospheres brain
14 chr8:59918800-59922600 Weak transcription Fetal Brain Male brain
15 chr8:59919000-59923000 Weak transcription Stomach Smooth Muscle stomach
16 chr8:59919000-59927000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr8:59919000-59927000 Weak transcription Osteobl bone
18 chr8:59919000-59927800 Weak transcription HUES6 Cell Line embryonic stem cell
19 chr8:59919400-59922600 Weak transcription Pancreatic Islets Pancreatic Islet
20 chr8:59919400-59927200 Weak transcription ES-I3 Cell Line embryonic stem cell
21 chr8:59919600-59923800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr8:59919800-59921800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr8:59919800-59922600 Weak transcription Primary T cells from cord blood blood
24 chr8:59919800-59923400 Weak transcription Thymus Thymus
25 chr8:59919800-59924200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
26 chr8:59919800-59925800 Weak transcription Rectal Smooth Muscle rectum
27 chr8:59919800-59927000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
28 chr8:59919800-59927400 Weak transcription H1 Cell Line embryonic stem cell
29 chr8:59919800-59927600 Weak transcription Brain Anterior Caudate brain
30 chr8:59920000-59923000 Weak transcription Colon Smooth Muscle Colon
31 chr8:59920000-59925000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr8:59920600-59924000 Weak transcription iPS-15b Cell Line embryonic stem cell
33 chr8:59920600-59924000 Weak transcription iPS-18 Cell Line embryonic stem cell
34 chr8:59920600-59929400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
35 chr8:59920800-59921400 Genic enhancers Fetal Thymus thymus
36 chr8:59921000-59921200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr8:59921000-59921200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
38 chr8:59921000-59921200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
39 chr8:59921000-59921400 Enhancers Primary T cells fromperipheralblood blood
40 chr8:59921000-59921400 Enhancers Brain Germinal Matrix brain
41 chr8:59921000-59921400 Enhancers Gastric stomach
42 chr8:59921000-59922000 Genic enhancers Dnd41 blood
43 chr8:59921000-59925200 Weak transcription HUVEC blood vessel

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015