Variant report

Variant rs12004485
Chromosome Location chr9:683654-683655
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:90 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:653400-698000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr9:670800-706800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr9:674400-693200 Weak transcription Primary T cells from cord blood blood
4 chr9:677800-689400 Weak transcription Fetal Muscle Trunk muscle
5 chr9:678000-684000 Weak transcription Fetal Muscle Leg muscle
6 chr9:678000-684000 Weak transcription Pancreas Pancrea
7 chr9:678000-684000 Weak transcription Psoas Muscle Psoas
8 chr9:678000-688000 Weak transcription Gastric stomach
9 chr9:678000-695200 Weak transcription Colonic Mucosa Colon
10 chr9:678200-684200 Weak transcription NHLF lung
11 chr9:678400-683800 Weak transcription Duodenum Smooth Muscle Duodenum
12 chr9:679000-684200 Weak transcription Brain Substantia Nigra brain
13 chr9:680800-692800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
14 chr9:681400-684000 Weak transcription Breast Myoepithelial Primary Cells Breast
15 chr9:682400-684800 Enhancers Brain Hippocampus Middle brain
16 chr9:682600-683800 Enhancers iPS-20b Cell Line embryonic stem cell
17 chr9:682600-683800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr9:682600-684000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr9:682600-684000 Enhancers Brain Anterior Caudate brain
20 chr9:682600-684200 Enhancers HUES6 Cell Line embryonic stem cell
21 chr9:682600-684200 Enhancers Cortex derived primary cultured neurospheres brain
22 chr9:682600-684200 Enhancers Adipose Nuclei Adipose
23 chr9:682600-684400 Active TSS Pancreatic Islets Pancreatic Islet
24 chr9:682600-685200 Enhancers iPS-18 Cell Line embryonic stem cell
25 chr9:682600-685200 Enhancers Fetal Adrenal Gland Adrenal Gland
26 chr9:682600-686800 Enhancers Fetal Heart heart
27 chr9:682600-687600 Flanking Active TSS HUVEC blood vessel
28 chr9:682800-683800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr9:682800-684000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
30 chr9:682800-684000 Active TSS Fetal Intestine Large intestine
31 chr9:682800-684000 Enhancers HMEC breast
32 chr9:682800-684000 Enhancers NHDF-Ad bronchial
33 chr9:682800-684200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr9:682800-684200 Enhancers HUES64 Cell Line embryonic stem cell
35 chr9:682800-684200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
36 chr9:682800-684200 Enhancers NH-A brain
37 chr9:682800-684600 Enhancers Ovary ovary
38 chr9:682800-684800 Enhancers Right Atrium heart
39 chr9:682800-685600 Enhancers ES-I3 Cell Line embryonic stem cell
40 chr9:682800-687200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
41 chr9:682800-688000 Enhancers Skeletal Muscle Female skeletal muscle
42 chr9:682800-696800 Enhancers Placenta Amnion Placenta Amnion
43 chr9:683000-684000 Enhancers Muscle Satellite Cultured Cells --
44 chr9:683000-684000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
45 chr9:683000-684000 Enhancers Skeletal Muscle Male skeletal muscle
46 chr9:683000-684200 Enhancers Brain Inferior Temporal Lobe brain
47 chr9:683000-684200 Enhancers Hela-S3 cervix
48 chr9:683000-684200 Enhancers HSMM muscle
49 chr9:683000-684400 Active TSS HepG2 liver
50 chr9:683000-684600 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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