The 2.0 version of rSNPBase

Variant report

Variant rs12005119
Chromosome Location chr9:27061172-27061173
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:26985200-27063800 Weak transcription Primary T helper cells PMA-I stimulated --
2 chr9:27009800-27070000 Weak transcription Psoas Muscle Psoas
3 chr9:27014400-27068200 Weak transcription Fetal Heart heart
4 chr9:27018400-27065200 Weak transcription Osteobl bone
5 chr9:27019200-27061800 Weak transcription Skeletal Muscle Female skeletal muscle
6 chr9:27024400-27082600 Weak transcription Gastric stomach
7 chr9:27024600-27061400 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr9:27024600-27061800 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr9:27024600-27064400 Weak transcription Colonic Mucosa Colon
10 chr9:27024600-27075800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
11 chr9:27024600-27078600 Weak transcription Aorta Aorta
12 chr9:27024600-27079000 Weak transcription Pancreas Pancrea
13 chr9:27024600-27082400 Weak transcription Primary T cells from cord blood blood
14 chr9:27024600-27083400 Weak transcription Left Ventricle heart
15 chr9:27024600-27085000 Weak transcription Brain Cingulate Gyrus brain
16 chr9:27024600-27086800 Weak transcription Right Ventricle heart
17 chr9:27024800-27094800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr9:27025200-27064800 Weak transcription Fetal Brain Female brain
19 chr9:27025200-27078000 Weak transcription Skeletal Muscle Male skeletal muscle
20 chr9:27025400-27063600 Weak transcription Brain Substantia Nigra brain
21 chr9:27025400-27066800 Weak transcription Brain Anterior Caudate brain
22 chr9:27025400-27075600 Weak transcription Fetal Muscle Trunk muscle
23 chr9:27037000-27069600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
24 chr9:27038000-27085000 Weak transcription Brain Hippocampus Middle brain
25 chr9:27038200-27065400 Weak transcription Primary B cells from peripheral blood blood
26 chr9:27042400-27063600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
27 chr9:27046600-27068000 Weak transcription Rectal Smooth Muscle rectum
28 chr9:27048800-27076200 Weak transcription Stomach Smooth Muscle stomach
29 chr9:27049000-27065800 Weak transcription Primary T helper naive cells from peripheral blood blood
30 chr9:27049400-27067200 Weak transcription Cortex derived primary cultured neurospheres brain
31 chr9:27049400-27072600 Weak transcription Fetal Muscle Leg muscle
32 chr9:27049600-27063400 Weak transcription Thymus Thymus
33 chr9:27049600-27063600 Weak transcription Primary B cells from cord blood blood
34 chr9:27049600-27066800 Weak transcription Colon Smooth Muscle Colon
35 chr9:27049800-27071600 Weak transcription Fetal Stomach stomach
36 chr9:27053800-27063400 Weak transcription Fetal Lung lung
37 chr9:27053800-27086800 Weak transcription HSMM muscle
38 chr9:27054000-27065000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
39 chr9:27054600-27063400 Weak transcription HSMMtube muscle
40 chr9:27055000-27062200 Weak transcription A549 lung
41 chr9:27055000-27067200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr9:27055200-27063400 Weak transcription NHEK skin
43 chr9:27055200-27064000 Weak transcription Rectal Mucosa Donor 31 rectum
44 chr9:27055200-27087000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr9:27055800-27062200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr9:27057400-27061200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr9:27057400-27063800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
48 chr9:27057400-27083000 Weak transcription Liver Liver
49 chr9:27057600-27064400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr9:27058000-27063800 Weak transcription Duodenum Mucosa Duodenum

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Last update: Aug 31, 2015