Variant report

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10827768	0.91[YRI][hapmap]
rs11011098	1.00[YRI][hapmap];0.84[AFR][1000 genomes]
rs11011099	1.00[YRI][hapmap]
rs11011101	0.91[YRI][hapmap];0.82[AFR][1000 genomes]
rs11011102	1.00[YRI][hapmap];0.82[AFR][1000 genomes]
rs11011103	1.00[YRI][hapmap];0.82[AFR][1000 genomes]
rs11011105	0.91[YRI][hapmap];0.81[AFR][1000 genomes]
rs11011106	0.91[YRI][hapmap]
rs11011107	0.91[YRI][hapmap]
rs11011108	0.91[YRI][hapmap]
rs12356232	0.91[YRI][hapmap]
rs12778083	0.87[AFR][1000 genomes]
rs12778104	1.00[YRI][hapmap];0.85[AFR][1000 genomes]
rs1926129	0.91[YRI][hapmap]
rs1926131	0.98[ASN][1000 genomes]
rs1926133	0.91[YRI][hapmap]
rs1926134	0.91[YRI][hapmap]
rs34239465	0.85[AFR][1000 genomes]
rs61859309	0.84[AFR][1000 genomes]
rs6482029	0.85[AFR][1000 genomes]
rs7069858	1.00[YRI][hapmap];0.85[AFR][1000 genomes]
rs7082383	0.91[YRI][hapmap]
rs7093136	0.81[AFR][1000 genomes]
rs7093790	1.00[YRI][hapmap];0.82[AFR][1000 genomes]
rs7097277	0.91[YRI][hapmap]
rs7100025	1.00[CHB][hapmap];0.91[JPT][hapmap];0.91[ASN][1000 genomes]
rs7905906	1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2758213	chr10:37285763-37625699	Enhancers Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Active TSS Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
2	esv2759742	chr10:37285763-37625699	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Bivalent/Poised TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
3	nsv947605	chr10:37432194-37615294	ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Active TSS Strong transcription	TF binding region Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
4	nsv1045454	chr10:37512369-37678936	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
5	esv2750892	chr10:37525594-37733381	Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:37582400-37585400	ZNF genes & repeats	HUES48 Cell Line	embryonic stem cell

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