The 2.0 version of rSNPBase

Variant report

Variant rs12021968
Chromosome Location chr1:59223056-59223057
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:59218000-59223200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
2 chr1:59218200-59223200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
3 chr1:59218200-59223800 Enhancers NHDF-Ad bronchial
4 chr1:59218600-59223400 Enhancers NHLF lung
5 chr1:59218800-59223200 Enhancers Fetal Thymus thymus
6 chr1:59219800-59223200 Enhancers Primary hematopoietic stem cells blood
7 chr1:59219800-59223200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
8 chr1:59220000-59223200 Enhancers Left Ventricle heart
9 chr1:59220000-59223200 Enhancers Small Intestine intestine
10 chr1:59220000-59223400 Enhancers Primary T killer naive cells fromperipheralblood blood
11 chr1:59220400-59223200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
12 chr1:59220400-59223200 Enhancers Primary T helper 17 cells PMA-I stimulated --
13 chr1:59220800-59223200 Enhancers Duodenum Mucosa Duodenum
14 chr1:59221200-59223200 Enhancers Primary T cells from cord blood blood
15 chr1:59221200-59228800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
16 chr1:59221400-59223200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
17 chr1:59221400-59223400 Enhancers Primary Natural Killer cells fromperipheralblood blood
18 chr1:59221800-59223200 Enhancers Primary T cells fromperipheralblood blood
19 chr1:59221800-59223200 Enhancers Primary T helper cells PMA-I stimulated --
20 chr1:59222200-59223200 Enhancers Primary T helper naive cells from peripheral blood blood
21 chr1:59222200-59223600 Enhancers Primary T killer memory cells from peripheral blood blood
22 chr1:59222200-59223600 Enhancers HUVEC blood vessel
23 chr1:59222200-59227600 Weak transcription NH-A brain
24 chr1:59222200-59228600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr1:59222200-59230400 Weak transcription Lung lung
26 chr1:59222400-59223200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr1:59222400-59227600 Weak transcription Hela-S3 cervix
28 chr1:59222400-59227800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr1:59222600-59223200 Enhancers Dnd41 blood
30 chr1:59222600-59224400 Weak transcription HepG2 liver
31 chr1:59222600-59227800 Weak transcription HSMM muscle
32 chr1:59222600-59228600 Weak transcription Rectal Smooth Muscle rectum
33 chr1:59222800-59227000 Weak transcription HMEC breast
34 chr1:59222800-59227400 Weak transcription Muscle Satellite Cultured Cells --
35 chr1:59222800-59227600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr1:59222800-59227800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr1:59222800-59227800 Weak transcription NHEK skin
38 chr1:59222800-59227800 Weak transcription Osteobl bone
39 chr1:59222800-59229000 Weak transcription Right Atrium heart
40 chr1:59223000-59227400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr1:59223000-59227400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
42 chr1:59223000-59227600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr1:59223000-59230200 Weak transcription Aorta Aorta

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Last update: Aug 31, 2015