The 2.0 version of rSNPBase

Variant report

Variant rs12023748
Chromosome Location chr1:149941228-149941229
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:149909400-149947000 Weak transcription Fetal Brain Male brain
2 chr1:149912600-149941600 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr1:149921200-149942600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr1:149922400-149951600 Weak transcription Small Intestine intestine
5 chr1:149929400-149948400 Strong transcription Rectal Mucosa Donor 29 rectum
6 chr1:149929600-149950200 Strong transcription Osteobl bone
7 chr1:149930400-149943600 Strong transcription Fetal Stomach stomach
8 chr1:149930800-149959000 Weak transcription ES-WA7 Cell Line embryonic stem cell
9 chr1:149931800-149946200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
10 chr1:149931800-149949600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr1:149931800-149949800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
12 chr1:149932000-149949200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr1:149932000-149949600 Strong transcription HUES6 Cell Line embryonic stem cell
14 chr1:149932200-149942600 Weak transcription ES-I3 Cell Line embryonic stem cell
15 chr1:149933000-149945400 Strong transcription HUES48 Cell Line embryonic stem cell
16 chr1:149933200-149947000 Strong transcription Fetal Intestine Large intestine
17 chr1:149933200-149949600 Strong transcription HUES64 Cell Line embryonic stem cell
18 chr1:149934200-149958000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
19 chr1:149934400-149949600 Strong transcription Fetal Muscle Leg muscle
20 chr1:149934600-149947600 Weak transcription Primary B cells from peripheral blood blood
21 chr1:149934600-149949600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
22 chr1:149934600-149949600 Weak transcription Primary T killer memory cells from peripheral blood blood
23 chr1:149934800-149941600 Strong transcription GM12878-XiMat blood
24 chr1:149935600-149950400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr1:149935800-149941400 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
26 chr1:149935800-149947400 Strong transcription Duodenum Mucosa Duodenum
27 chr1:149935800-149948000 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr1:149935800-149948200 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
29 chr1:149935800-149949400 Strong transcription Left Ventricle heart
30 chr1:149936000-149943600 Strong transcription Fetal Intestine Small intestine
31 chr1:149936200-149948400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr1:149936400-149947600 Strong transcription NH-A brain
33 chr1:149936400-149949400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr1:149936400-149949600 Strong transcription Breast Myoepithelial Primary Cells Breast
35 chr1:149936600-149948400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr1:149937200-149948400 Strong transcription Muscle Satellite Cultured Cells --
37 chr1:149937200-149949600 Strong transcription Stomach Smooth Muscle stomach
38 chr1:149937400-149941400 Strong transcription Primary T helper cells PMA-I stimulated --
39 chr1:149937400-149944600 Strong transcription Colonic Mucosa Colon
40 chr1:149937400-149948400 Strong transcription Brain Anterior Caudate brain
41 chr1:149937600-149946800 Weak transcription Primary T helper naive cells fromperipheralblood blood
42 chr1:149937800-149945200 Weak transcription Pancreas Pancrea
43 chr1:149938000-149944000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr1:149938000-149950600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
45 chr1:149938000-149951000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
46 chr1:149938000-149953000 Weak transcription Thymus Thymus
47 chr1:149938200-149942800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
48 chr1:149938200-149947000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
49 chr1:149938200-149950600 Weak transcription Stomach Mucosa stomach
50 chr1:149938600-149948400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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Last update: Aug 31, 2015