Variant report

Variant rs12027482
Chromosome Location chr1:145496996-145496997
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:145477600-145498400 Weak transcription Gastric stomach
2 chr1:145478800-145498600 Weak transcription A549 lung
3 chr1:145479600-145498000 Weak transcription NHEK skin
4 chr1:145479600-145498400 Weak transcription HMEC breast
5 chr1:145479600-145506800 Weak transcription Colonic Mucosa Colon
6 chr1:145480000-145498400 Weak transcription Fetal Kidney kidney
7 chr1:145480400-145506800 Weak transcription Small Intestine intestine
8 chr1:145480800-145498000 Weak transcription Rectal Mucosa Donor 29 rectum
9 chr1:145481000-145499000 Weak transcription Fetal Brain Male brain
10 chr1:145481000-145506600 Weak transcription Brain Substantia Nigra brain
11 chr1:145481200-145501400 Strong transcription Fetal Muscle Leg muscle
12 chr1:145481400-145498400 Weak transcription Aorta Aorta
13 chr1:145481400-145506400 Weak transcription Pancreas Pancrea
14 chr1:145481600-145497400 Weak transcription Brain Hippocampus Middle brain
15 chr1:145484400-145497400 Weak transcription Hela-S3 cervix
16 chr1:145484400-145498000 Weak transcription Spleen Spleen
17 chr1:145484600-145499400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
18 chr1:145486000-145498200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr1:145487600-145497400 Weak transcription Brain Germinal Matrix brain
20 chr1:145487600-145497400 Weak transcription Psoas Muscle Psoas
21 chr1:145487600-145498000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
22 chr1:145487600-145498400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
23 chr1:145487600-145507000 Weak transcription Fetal Heart heart
24 chr1:145488000-145497600 Weak transcription Skeletal Muscle Male skeletal muscle
25 chr1:145488000-145497800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
26 chr1:145488000-145498200 Weak transcription HUES6 Cell Line embryonic stem cell
27 chr1:145488000-145506800 Weak transcription iPS-18 Cell Line embryonic stem cell
28 chr1:145488400-145498400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr1:145488600-145497400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
30 chr1:145489200-145497200 Weak transcription Primary hematopoietic stem cells short term culture blood
31 chr1:145489200-145498400 Weak transcription Placenta Placenta
32 chr1:145489400-145502200 Strong transcription Fetal Stomach stomach
33 chr1:145489800-145500000 Strong transcription Primary T cells fromperipheralblood blood
34 chr1:145490400-145504200 Strong transcription Fetal Muscle Trunk muscle
35 chr1:145490800-145497400 Weak transcription Primary T helper naive cells from peripheral blood blood
36 chr1:145490800-145497400 Weak transcription HepG2 liver
37 chr1:145490800-145498000 Weak transcription Duodenum Mucosa Duodenum
38 chr1:145490800-145498400 Weak transcription HSMMtube muscle
39 chr1:145491000-145498200 Weak transcription Fetal Intestine Small intestine
40 chr1:145491200-145506000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr1:145491400-145499800 Strong transcription Fetal Lung lung
42 chr1:145491600-145500000 Strong transcription Primary T helper naive cells fromperipheralblood blood
43 chr1:145491600-145500000 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
44 chr1:145492400-145497400 Weak transcription Primary T killer naive cells fromperipheralblood blood
45 chr1:145492400-145497400 Weak transcription NHLF lung
46 chr1:145492400-145498000 Weak transcription Skeletal Muscle Female skeletal muscle
47 chr1:145492400-145501000 Weak transcription Primary T killer memory cells from peripheral blood blood
48 chr1:145492600-145497400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
49 chr1:145492600-145497400 Weak transcription Left Ventricle heart
50 chr1:145492600-145497400 Weak transcription Ovary ovary

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