The 2.0 version of rSNPBase

Variant report

Variant rs2479855
Chromosome Location chr1:145468414-145468415
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:145455200-145469800 Weak transcription Aorta Aorta
2 chr1:145456200-145469800 Weak transcription Fetal Muscle Trunk muscle
3 chr1:145457000-145470000 Weak transcription Gastric stomach
4 chr1:145457400-145469400 Weak transcription Fetal Heart heart
5 chr1:145457400-145469800 Weak transcription Psoas Muscle Psoas
6 chr1:145457400-145469800 Weak transcription NH-A brain
7 chr1:145457400-145470000 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr1:145457600-145469200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
9 chr1:145457600-145469600 Weak transcription Brain Cingulate Gyrus brain
10 chr1:145457600-145469600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr1:145457600-145469600 Weak transcription Duodenum Mucosa Duodenum
12 chr1:145457800-145468800 Weak transcription Primary T killer memory cells from peripheral blood blood
13 chr1:145457800-145469200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr1:145457800-145469200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
15 chr1:145457800-145469200 Weak transcription Stomach Smooth Muscle stomach
16 chr1:145457800-145469400 Weak transcription Brain Angular Gyrus brain
17 chr1:145457800-145469400 Weak transcription Duodenum Smooth Muscle Duodenum
18 chr1:145457800-145469400 Weak transcription Rectal Smooth Muscle rectum
19 chr1:145457800-145469600 Weak transcription Brain Hippocampus Middle brain
20 chr1:145458000-145469400 Weak transcription Fetal Brain Female brain
21 chr1:145458000-145469400 Weak transcription Skeletal Muscle Female skeletal muscle
22 chr1:145458000-145469600 Weak transcription Osteobl bone
23 chr1:145458000-145469800 Weak transcription Fetal Lung lung
24 chr1:145460000-145468600 Weak transcription Primary T cells fromperipheralblood blood
25 chr1:145460000-145469200 Weak transcription Primary T cells from cord blood blood
26 chr1:145460200-145468600 Weak transcription Left Ventricle heart
27 chr1:145460200-145469600 Weak transcription Breast Myoepithelial Primary Cells Breast
28 chr1:145460200-145469600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr1:145460200-145469600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr1:145460200-145469800 Weak transcription Right Ventricle heart
31 chr1:145461000-145468600 Weak transcription Primary T helper cells PMA-I stimulated --
32 chr1:145462200-145468600 Weak transcription Primary T helper naive cells fromperipheralblood blood
33 chr1:145462200-145469600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
34 chr1:145462400-145469600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
35 chr1:145462400-145470000 Weak transcription Spleen Spleen
36 chr1:145462800-145468600 Weak transcription Primary neutrophils fromperipheralblood blood
37 chr1:145462800-145469400 Weak transcription HepG2 liver
38 chr1:145463000-145469200 Weak transcription Liver Liver
39 chr1:145463800-145469600 Weak transcription Colon Smooth Muscle Colon
40 chr1:145466800-145469400 Weak transcription HSMMtube muscle
41 chr1:145467000-145468600 Weak transcription Primary T killer naive cells fromperipheralblood blood
42 chr1:145467000-145469400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr1:145467000-145469400 Weak transcription Muscle Satellite Cultured Cells --
44 chr1:145467000-145469400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
45 chr1:145467000-145469600 Weak transcription Brain Substantia Nigra brain
46 chr1:145467200-145468600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
47 chr1:145467200-145469200 Weak transcription Primary T helper naive cells from peripheral blood blood
48 chr1:145467400-145468600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
49 chr1:145467400-145468600 Weak transcription Primary T helper cells fromperipheralblood blood
50 chr1:145467600-145468800 Weak transcription Primary hematopoietic stem cells short term culture blood

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Last update: Aug 31, 2015