Variant report

Variant rs833940
Chromosome Location chr1:145449232-145449233
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:145439600-145449400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr1:145440600-145449600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr1:145441400-145449400 Weak transcription Dnd41 blood
4 chr1:145441400-145449600 Weak transcription ES-WA7 Cell Line embryonic stem cell
5 chr1:145442400-145449400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
6 chr1:145442400-145455200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
7 chr1:145442600-145449400 Weak transcription Lung lung
8 chr1:145442800-145452600 Weak transcription Aorta Aorta
9 chr1:145443200-145449600 Weak transcription Fetal Intestine Large intestine
10 chr1:145443200-145451800 Weak transcription Brain Angular Gyrus brain
11 chr1:145443200-145454200 Enhancers Primary T cells fromperipheralblood blood
12 chr1:145443200-145454200 Weak transcription Brain Inferior Temporal Lobe brain
13 chr1:145443200-145455000 Weak transcription Brain Germinal Matrix brain
14 chr1:145443400-145449400 Weak transcription Breast Myoepithelial Primary Cells Breast
15 chr1:145443600-145455600 Weak transcription Pancreatic Islets Pancreatic Islet
16 chr1:145444400-145454400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
17 chr1:145445800-145454200 Enhancers Primary T helper cells fromperipheralblood blood
18 chr1:145446000-145451400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
19 chr1:145446400-145449600 Enhancers Primary T helper naive cells fromperipheralblood blood
20 chr1:145447200-145449400 Weak transcription GM12878-XiMat blood
21 chr1:145447200-145454200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
22 chr1:145447200-145456200 Enhancers Pancreas Pancrea
23 chr1:145448000-145449400 Enhancers Psoas Muscle Psoas
24 chr1:145448000-145449600 Enhancers Primary T helper cells PMA-I stimulated --
25 chr1:145448000-145449800 Enhancers Fetal Adrenal Gland Adrenal Gland
26 chr1:145448000-145454000 Enhancers Primary T helper naive cells from peripheral blood blood
27 chr1:145448000-145454200 Enhancers Primary T killer memory cells from peripheral blood blood
28 chr1:145448000-145455200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr1:145448200-145449400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
30 chr1:145448200-145449400 Enhancers Brain Hippocampus Middle brain
31 chr1:145448200-145449400 Enhancers Colon Smooth Muscle Colon
32 chr1:145448200-145450000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr1:145448200-145450000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
34 chr1:145448200-145450000 Enhancers Primary hematopoietic stem cells short term culture blood
35 chr1:145448200-145450000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
36 chr1:145448200-145450000 Enhancers Primary mononuclear cells fromperipheralblood Blood
37 chr1:145448200-145450200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
38 chr1:145448200-145450200 Enhancers Primary hematopoietic stem cells blood
39 chr1:145448200-145450200 Enhancers Liver Liver
40 chr1:145448200-145450200 Enhancers Fetal Stomach stomach
41 chr1:145448200-145450400 Enhancers ES-I3 Cell Line embryonic stem cell
42 chr1:145448200-145450400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr1:145448200-145453400 Enhancers Stomach Mucosa stomach
44 chr1:145448200-145454200 Enhancers Primary T regulatory cells fromperipheralblood blood
45 chr1:145448200-145454200 Enhancers Primary Natural Killer cells fromperipheralblood blood
46 chr1:145448200-145454400 Enhancers Primary B cells from peripheral blood blood
47 chr1:145448200-145455600 Enhancers Fetal Muscle Leg muscle
48 chr1:145448200-145457400 Enhancers Sigmoid Colon Sigmoid Colon
49 chr1:145448200-145457800 Enhancers Placenta Placenta
50 chr1:145448400-145450000 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived

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