Variant report

Variant	rs1204222
Chromosome Location	chr6:13865227-13865228
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs1204189	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs1204196	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs1204211	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs1204221	0.87[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1204233	0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1204243	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1204250	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1204252	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1204263	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1475251	0.84[ASN][1000 genomes]
rs35376934	0.87[ASN][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:13862600-13865600	Enhancers	Fetal Intestine Small	intestine
2	chr6:13863800-13865600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr6:13864400-13866800	Weak transcription	Fetal Brain Male	brain
4	chr6:13864400-13872600	Weak transcription	Placenta	Placenta
5	chr6:13865000-13865800	Enhancers	Primary monocytes fromperipheralblood	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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