The 2.0 version of rSNPBase

Variant report

Variant rs12045459
Chromosome Location chr1:9604768-9604769
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:9600600-9608800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
2 chr1:9600600-9608800 Weak transcription Gastric stomach
3 chr1:9600600-9608800 Weak transcription Spleen Spleen
4 chr1:9600600-9609000 Weak transcription Esophagus oesophagus
5 chr1:9600600-9609000 Weak transcription Pancreas Pancrea
6 chr1:9600600-9613800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
7 chr1:9600600-9615400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr1:9600600-9615600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr1:9600800-9608000 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr1:9600800-9611800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr1:9600800-9614000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
12 chr1:9600800-9614000 Weak transcription Fetal Muscle Leg muscle
13 chr1:9600800-9615400 Weak transcription HSMM muscle
14 chr1:9600800-9615600 Weak transcription Ovary ovary
15 chr1:9600800-9619200 Weak transcription Primary T regulatory cells fromperipheralblood blood
16 chr1:9601000-9606600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
17 chr1:9601000-9612000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr1:9601000-9613200 Weak transcription Primary T cells from cord blood blood
19 chr1:9601000-9613600 Weak transcription iPS-18 Cell Line embryonic stem cell
20 chr1:9601000-9613800 Weak transcription Primary B cells from peripheral blood blood
21 chr1:9601000-9616000 Weak transcription Primary T killer memory cells from peripheral blood blood
22 chr1:9601000-9616200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
23 chr1:9601000-9617800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
24 chr1:9601000-9618000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
25 chr1:9601000-9621200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr1:9601000-9621400 Weak transcription A549 lung
27 chr1:9601200-9608600 Weak transcription Skeletal Muscle Female skeletal muscle
28 chr1:9601200-9608800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
29 chr1:9601200-9613600 Weak transcription HUES6 Cell Line embryonic stem cell
30 chr1:9601200-9615400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
31 chr1:9601200-9615600 Weak transcription Primary B cells from cord blood blood
32 chr1:9601200-9615800 Weak transcription ES-WA7 Cell Line embryonic stem cell
33 chr1:9601200-9616000 Weak transcription HMEC breast
34 chr1:9601200-9617200 Weak transcription ES-I3 Cell Line embryonic stem cell
35 chr1:9601200-9617600 Weak transcription iPS-15b Cell Line embryonic stem cell
36 chr1:9602400-9608800 Weak transcription Lung lung
37 chr1:9602400-9614000 Weak transcription Fetal Muscle Trunk muscle
38 chr1:9602400-9615200 Weak transcription Fetal Thymus thymus
39 chr1:9602600-9606800 Weak transcription Psoas Muscle Psoas
40 chr1:9602600-9606800 Weak transcription GM12878-XiMat blood
41 chr1:9602600-9611200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr1:9602600-9611200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
43 chr1:9602600-9613600 Weak transcription Primary T helper cells fromperipheralblood blood
44 chr1:9602600-9613800 Weak transcription Rectal Mucosa Donor 29 rectum
45 chr1:9602600-9614800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
46 chr1:9602600-9614800 Weak transcription Rectal Smooth Muscle rectum
47 chr1:9602600-9615000 Weak transcription Muscle Satellite Cultured Cells --
48 chr1:9602600-9615400 Weak transcription Brain Angular Gyrus brain
49 chr1:9602600-9615400 Weak transcription Brain Anterior Caudate brain
50 chr1:9602600-9615400 Weak transcription Thymus Thymus

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Last update: Aug 31, 2015