Variant report

Variant	rs12062933
Chromosome Location	chr1:215159091-215159092
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10864142	1.00[ASN][1000 genomes]
rs11120457	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs11120458	1.00[ASN][1000 genomes]
rs11120466	1.00[ASN][1000 genomes]
rs11805210	1.00[ASN][1000 genomes]
rs12067044	0.93[AMR][1000 genomes]
rs12073570	0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12078174	0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12079236	0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12084891	1.00[ASN][1000 genomes]
rs56069026	1.00[ASN][1000 genomes]
rs61255106	1.00[ASN][1000 genomes]
rs6679757	1.00[ASN][1000 genomes]
rs72760669	0.98[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72762605	1.00[ASN][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:215141800-215162600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
2	chr1:215157000-215162400	Weak transcription	NHDF-Ad	bronchial
3	chr1:215158400-215162800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr1:215158600-215162600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
5	chr1:215158600-215162800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links