Variant report

Variant	rs12079236
Chromosome Location	chr1:215159119-215159120
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10864142	1.00[ASN][1000 genomes]
rs11120457	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs11120458	1.00[ASN][1000 genomes]
rs11120466	1.00[ASN][1000 genomes]
rs11805210	1.00[ASN][1000 genomes]
rs12062933	0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12067044	0.96[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12073570	0.98[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs12078174	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12084891	1.00[ASN][1000 genomes]
rs56069026	1.00[ASN][1000 genomes]
rs61255106	1.00[ASN][1000 genomes]
rs6679757	1.00[ASN][1000 genomes]
rs72760669	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72762605	1.00[ASN][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:215141800-215162600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
2	chr1:215157000-215162400	Weak transcription	NHDF-Ad	bronchial
3	chr1:215158400-215162800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr1:215158600-215162600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
5	chr1:215158600-215162800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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