The 2.0 version of rSNPBase

Variant report

Variant rs12065544
Chromosome Location chr1:171193029-171193030
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:20 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:171189800-171193400 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr1:171190200-171193200 Enhancers Cortex derived primary cultured neurospheres brain
3 chr1:171190200-171193400 Enhancers NHEK skin
4 chr1:171190200-171193800 Enhancers Fetal Lung lung
5 chr1:171190400-171193800 Enhancers HUES64 Cell Line embryonic stem cell
6 chr1:171190600-171193400 Enhancers HUES48 Cell Line embryonic stem cell
7 chr1:171190600-171194000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr1:171190600-171194200 Enhancers Breast Myoepithelial Primary Cells Breast
9 chr1:171191400-171197200 Weak transcription Fetal Kidney kidney
10 chr1:171191800-171195600 Weak transcription Fetal Adrenal Gland Adrenal Gland
11 chr1:171192600-171193400 Enhancers iPS-18 Cell Line embryonic stem cell
12 chr1:171192600-171193800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr1:171192600-171194000 Weak transcription Small Intestine intestine
14 chr1:171192600-171195600 Weak transcription ES-I3 Cell Line embryonic stem cell
15 chr1:171192800-171195600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr1:171193000-171193400 Weak transcription H9 Cell Line embryonic stem cell
17 chr1:171193000-171193400 Weak transcription Stomach Mucosa stomach
18 chr1:171193000-171194000 Enhancers Muscle Satellite Cultured Cells --
19 chr1:171193000-171194200 Enhancers Primary monocytes fromperipheralblood blood
20 chr1:171193000-171194200 Enhancers HMEC breast

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Last update: Aug 31, 2015