Variant report

Variant	rs12077096
Chromosome Location	chr1:217318794-217318795
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs11117767	1.00[YRI][hapmap]
rs12057613	1.00[YRI][hapmap]
rs12063778	0.87[AFR][1000 genomes]
rs12066856	1.00[YRI][hapmap]
rs12069409	1.00[YRI][hapmap];0.87[AFR][1000 genomes]
rs12073803	1.00[YRI][hapmap]
rs12082817	1.00[YRI][hapmap]
rs12085414	1.00[YRI][hapmap]
rs12089012	1.00[YRI][hapmap]
rs12091466	1.00[YRI][hapmap]
rs12095017	1.00[YRI][hapmap]
rs12095871	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv468160	chr1:217318595-217324654	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
2	nsv468172	chr1:217318595-217324654	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
3	nsv549206	chr1:217318595-217324654	ZNF genes & repeats Weak transcription Enhancers	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:217318400-217325800	Weak transcription	Aorta	Aorta

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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