Variant report

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs10493462	1.00[EUR][1000 genomes]
rs12079486	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17131144	1.00[EUR][1000 genomes]
rs17131147	1.00[EUR][1000 genomes]
rs17131149	1.00[EUR][1000 genomes]
rs17131153	1.00[EUR][1000 genomes]
rs17131173	1.00[EUR][1000 genomes]
rs17131175	0.94[YRI][hapmap];1.00[EUR][1000 genomes]
rs17131185	1.00[EUR][1000 genomes]
rs17131194	1.00[EUR][1000 genomes]
rs17131195	1.00[EUR][1000 genomes]
rs17131197	1.00[EUR][1000 genomes]
rs17131198	1.00[EUR][1000 genomes]
rs57557771	1.00[EUR][1000 genomes]
rs58361762	1.00[EUR][1000 genomes]
rs59352671	1.00[EUR][1000 genomes]
rs6681058	1.00[EUR][1000 genomes]
rs72915800	1.00[EUR][1000 genomes]
rs72917803	1.00[EUR][1000 genomes]
rs72917809	1.00[EUR][1000 genomes]
rs72926213	1.00[EUR][1000 genomes]
rs72929205	1.00[EUR][1000 genomes]
rs72943268	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72943277	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72943286	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72945223	1.00[EUR][1000 genomes]
rs72945229	1.00[EUR][1000 genomes]
rs72945240	1.00[EUR][1000 genomes]
rs74088023	1.00[EUR][1000 genomes]
rs74088028	1.00[EUR][1000 genomes]
rs970938	0.89[YRI][hapmap];1.00[EUR][1000 genomes]
rs970939	0.89[YRI][hapmap];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv531879	chr1:70386455-70644617	Enhancers Weak transcription Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	6 gene(s)	inside rSNPs	diseases
2	nsv871018	chr1:70450024-70496379	Strong transcription Weak transcription ZNF genes & repeats Enhancers Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	nsv526839	chr1:70459886-70475794	Enhancers Weak transcription Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:70450800-70481200	Weak transcription	Fetal Brain Female	brain
2	chr1:70464800-70509000	Weak transcription	Brain Angular Gyrus	brain
3	chr1:70469000-70470400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr1:70469200-70470400	Enhancers	Fetal Lung	lung
5	chr1:70470000-70470400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin

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