The 2.0 version of rSNPBase

Variant report

Variant rs12089897
Chromosome Location chr1:62697753-62697754
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:62693600-62700800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:62693600-62700800 Enhancers Placenta Placenta
3 chr1:62694400-62699400 Enhancers HMEC breast
4 chr1:62694800-62697800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr1:62694800-62697800 Enhancers NHEK skin
6 chr1:62694800-62698600 Weak transcription Fetal Lung lung
7 chr1:62695000-62697800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr1:62695800-62699000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
9 chr1:62695800-62703400 Weak transcription Adipose Nuclei Adipose
10 chr1:62696000-62698000 Weak transcription Fetal Muscle Trunk muscle
11 chr1:62696000-62700000 Weak transcription iPS-15b Cell Line embryonic stem cell
12 chr1:62696000-62700200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
13 chr1:62696600-62703600 Weak transcription Fetal Stomach stomach
14 chr1:62696800-62698400 Weak transcription Fetal Muscle Leg muscle
15 chr1:62697000-62697800 Enhancers Hela-S3 cervix
16 chr1:62697000-62699800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr1:62697000-62700200 Weak transcription H1 Cell Line embryonic stem cell
18 chr1:62697000-62702800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr1:62697000-62703600 Weak transcription H9 Cell Line embryonic stem cell
20 chr1:62697000-62706600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr1:62697200-62698600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
22 chr1:62697200-62698600 Weak transcription HepG2 liver
23 chr1:62697200-62698800 Weak transcription HUES48 Cell Line embryonic stem cell
24 chr1:62697200-62700400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr1:62697200-62702800 Weak transcription A549 lung
26 chr1:62697400-62698000 Weak transcription Placenta Amnion Placenta Amnion
27 chr1:62697400-62698400 Weak transcription Muscle Satellite Cultured Cells --
28 chr1:62697400-62698600 Weak transcription HSMMtube muscle
29 chr1:62697400-62699800 Weak transcription ES-I3 Cell Line embryonic stem cell
30 chr1:62697400-62700200 Weak transcription iPS-18 Cell Line embryonic stem cell
31 chr1:62697400-62700400 Weak transcription HSMM muscle
32 chr1:62697400-62701800 Weak transcription HUES6 Cell Line embryonic stem cell
33 chr1:62697400-62702400 Weak transcription NH-A brain
34 chr1:62697400-62703200 Weak transcription HUES64 Cell Line embryonic stem cell
35 chr1:62697600-62698200 Weak transcription Breast Myoepithelial Primary Cells Breast
36 chr1:62697600-62698800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr1:62697600-62699600 Weak transcription iPS-20b Cell Line embryonic stem cell
38 chr1:62697600-62700000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015