Variant report

Variant rs12093615
Chromosome Location chr1:209280343-209280344
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:19 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:209273800-209281800 Enhancers Fetal Brain Female brain
2 chr1:209273800-209282200 Enhancers Fetal Brain Male brain
3 chr1:209278200-209280600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
4 chr1:209278200-209280800 Enhancers Cortex derived primary cultured neurospheres brain
5 chr1:209279000-209280400 Enhancers HUES64 Cell Line embryonic stem cell
6 chr1:209279000-209280400 Enhancers Brain Germinal Matrix brain
7 chr1:209279000-209280800 Enhancers Colon Smooth Muscle Colon
8 chr1:209279000-209280800 Enhancers Duodenum Mucosa Duodenum
9 chr1:209279000-209284800 ZNF genes & repeats GM12878-XiMat blood
10 chr1:209279200-209280400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr1:209279200-209280600 Enhancers Fetal Muscle Trunk muscle
12 chr1:209279200-209280600 Enhancers Fetal Muscle Leg muscle
13 chr1:209279400-209280800 Enhancers Fetal Stomach stomach
14 chr1:209279600-209280600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr1:209279600-209282000 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr1:209280000-209282400 Weak transcription Rectal Mucosa Donor 29 rectum
17 chr1:209280000-209283200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
18 chr1:209280200-209280600 Enhancers Brain Inferior Temporal Lobe brain
19 chr1:209280200-209281400 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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