The 2.0 version of rSNPBase

Variant report

Variant rs12094467
Chromosome Location chr1:165724377-165724378
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:165687600-165737600 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr1:165694600-165736800 Strong transcription Monocytes-CD14+_RO01746 blood
3 chr1:165705000-165724800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
4 chr1:165710400-165727000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
5 chr1:165711200-165736200 Weak transcription Pancreatic Islets Pancreatic Islet
6 chr1:165712200-165737000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
7 chr1:165712400-165726800 Weak transcription Fetal Lung lung
8 chr1:165712400-165727000 Weak transcription Cortex derived primary cultured neurospheres brain
9 chr1:165712400-165727200 Weak transcription HMEC breast
10 chr1:165712600-165737000 Weak transcription Colonic Mucosa Colon
11 chr1:165713400-165733600 Weak transcription NHEK skin
12 chr1:165713600-165737000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
13 chr1:165716800-165728000 Strong transcription Primary hematopoietic stem cells short term culture blood
14 chr1:165717400-165728000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr1:165718000-165725800 Weak transcription HSMM muscle
16 chr1:165718400-165725000 Weak transcription Primary B cells from cord blood blood
17 chr1:165718800-165725600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
18 chr1:165719600-165725000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr1:165720000-165725600 Strong transcription Dnd41 blood
20 chr1:165720200-165725600 Strong transcription Stomach Smooth Muscle stomach
21 chr1:165720800-165733400 Weak transcription A549 lung
22 chr1:165721400-165725000 Strong transcription NHLF lung
23 chr1:165721800-165724400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr1:165721800-165724600 Weak transcription Left Ventricle heart
25 chr1:165721800-165724600 Weak transcription Psoas Muscle Psoas
26 chr1:165721800-165724800 Strong transcription Primary T cells fromperipheralblood blood
27 chr1:165721800-165724800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
28 chr1:165721800-165724800 Strong transcription Adipose Nuclei Adipose
29 chr1:165721800-165724800 Strong transcription Rectal Mucosa Donor 31 rectum
30 chr1:165721800-165725000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr1:165721800-165725000 Strong transcription Fetal Adrenal Gland Adrenal Gland
32 chr1:165721800-165725200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr1:165721800-165725200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
34 chr1:165721800-165725200 Strong transcription Fetal Intestine Small intestine
35 chr1:165721800-165725600 Strong transcription Primary T helper cells PMA-I stimulated --
36 chr1:165721800-165725800 Strong transcription Primary monocytes fromperipheralblood blood
37 chr1:165721800-165726200 Weak transcription Fetal Muscle Leg muscle
38 chr1:165721800-165726800 Weak transcription Aorta Aorta
39 chr1:165721800-165727200 Weak transcription Primary T helper naive cells fromperipheralblood blood
40 chr1:165721800-165727200 Weak transcription Right Ventricle heart
41 chr1:165721800-165728800 Weak transcription Brain Substantia Nigra brain
42 chr1:165721800-165728800 Strong transcription Fetal Intestine Large intestine
43 chr1:165721800-165729200 Strong transcription Rectal Mucosa Donor 29 rectum
44 chr1:165721800-165730800 Strong transcription Primary T helper cells fromperipheralblood blood
45 chr1:165721800-165731000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
46 chr1:165721800-165731200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
47 chr1:165721800-165732600 Strong transcription Primary T regulatory cells fromperipheralblood blood
48 chr1:165721800-165732600 Weak transcription Primary T killer memory cells from peripheral blood blood
49 chr1:165721800-165732600 Weak transcription Rectal Smooth Muscle rectum
50 chr1:165721800-165732800 Weak transcription Primary T killer naive cells fromperipheralblood blood

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Last update: Aug 31, 2015