The 2.0 version of rSNPBase

Variant report

Variant rs10800161
Chromosome Location chr1:165802428-165802429
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:90 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:165798600-165811000 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr1:165798800-165802600 Weak transcription Ovary ovary
3 chr1:165798800-165811000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr1:165798800-165811000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
5 chr1:165798800-165811400 Weak transcription Esophagus oesophagus
6 chr1:165798800-165811800 Weak transcription Primary B cells from cord blood blood
7 chr1:165798800-165814200 Weak transcription Fetal Muscle Trunk muscle
8 chr1:165799000-165804000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
9 chr1:165799000-165805800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
10 chr1:165799000-165807600 Weak transcription Fetal Lung lung
11 chr1:165799000-165810600 Weak transcription Fetal Adrenal Gland Adrenal Gland
12 chr1:165799000-165811000 Weak transcription Primary T regulatory cells fromperipheralblood blood
13 chr1:165799000-165811200 Weak transcription Duodenum Smooth Muscle Duodenum
14 chr1:165799000-165811800 Weak transcription Colon Smooth Muscle Colon
15 chr1:165799000-165811800 Weak transcription Fetal Intestine Large intestine
16 chr1:165799000-165811800 Weak transcription Fetal Stomach stomach
17 chr1:165799000-165818200 Weak transcription Rectal Mucosa Donor 31 rectum
18 chr1:165799200-165805800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
19 chr1:165799200-165805800 Weak transcription Skeletal Muscle Male skeletal muscle
20 chr1:165799200-165806600 Weak transcription Pancreatic Islets Pancreatic Islet
21 chr1:165799200-165811000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr1:165799200-165811400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
23 chr1:165799200-165811400 Weak transcription Brain Inferior Temporal Lobe brain
24 chr1:165799200-165811600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr1:165799200-165815800 Weak transcription Rectal Mucosa Donor 29 rectum
26 chr1:165799400-165802600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr1:165799400-165802600 Weak transcription NHLF lung
28 chr1:165799400-165804000 Weak transcription HUES48 Cell Line embryonic stem cell
29 chr1:165799400-165805400 Weak transcription Primary hematopoietic stem cells blood
30 chr1:165799400-165805800 Weak transcription Small Intestine intestine
31 chr1:165799400-165806000 Weak transcription HSMMtube muscle
32 chr1:165799400-165806000 Weak transcription HUVEC blood vessel
33 chr1:165799400-165806000 Weak transcription Osteobl bone
34 chr1:165799400-165806200 Weak transcription Stomach Mucosa stomach
35 chr1:165799400-165806800 Weak transcription Sigmoid Colon Sigmoid Colon
36 chr1:165799400-165810800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr1:165799400-165810800 Weak transcription NHEK skin
38 chr1:165799400-165811000 Weak transcription Fetal Muscle Leg muscle
39 chr1:165800600-165811600 Weak transcription Fetal Brain Male brain
40 chr1:165800800-165805800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr1:165801000-165805800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr1:165801400-165802800 Enhancers ES-I3 Cell Line embryonic stem cell
43 chr1:165801400-165803000 Enhancers HUES64 Cell Line embryonic stem cell
44 chr1:165801400-165804200 Enhancers Breast Myoepithelial Primary Cells Breast
45 chr1:165801400-165804400 Enhancers A549 lung
46 chr1:165801600-165802600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr1:165801600-165802800 Enhancers iPS-15b Cell Line embryonic stem cell
48 chr1:165801600-165803000 Enhancers ES-WA7 Cell Line embryonic stem cell
49 chr1:165801600-165803000 Enhancers Muscle Satellite Cultured Cells --
50 chr1:165801800-165802600 Strong transcription Fetal Intestine Small intestine

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Last update: Aug 31, 2015