The 2.0 version of rSNPBase

Variant report

Variant rs12095225
Chromosome Location chr1:67019085-67019086
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:67000400-67022000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr1:67000800-67029800 Weak transcription Primary hematopoietic stem cells blood
3 chr1:67001200-67022000 Weak transcription Right Ventricle heart
4 chr1:67007000-67021800 Weak transcription H9 Cell Line embryonic stem cell
5 chr1:67009000-67019600 Weak transcription Skeletal Muscle Male skeletal muscle
6 chr1:67009600-67019600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr1:67009800-67028200 Weak transcription Brain Germinal Matrix brain
8 chr1:67010000-67029000 Weak transcription Fetal Kidney kidney
9 chr1:67011000-67028000 Weak transcription HUVEC blood vessel
10 chr1:67011200-67021800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr1:67011200-67022000 Weak transcription Pancreas Pancrea
12 chr1:67011800-67029800 Weak transcription Fetal Brain Male brain
13 chr1:67012400-67021400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
14 chr1:67013800-67021200 Weak transcription Brain Inferior Temporal Lobe brain
15 chr1:67015800-67021600 Weak transcription Brain Anterior Caudate brain
16 chr1:67017400-67023800 Enhancers Fetal Heart heart
17 chr1:67017600-67019800 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin
18 chr1:67017600-67020200 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
19 chr1:67017800-67019200 Enhancers Fetal Thymus thymus
20 chr1:67017800-67022400 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
21 chr1:67018000-67019200 Enhancers Cortex derived primary cultured neurospheres brain
22 chr1:67018000-67019200 Enhancers Brain Substantia Nigra brain
23 chr1:67018000-67019200 Enhancers Fetal Lung lung
24 chr1:67018000-67020200 Enhancers NHLF lung
25 chr1:67018000-67023800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr1:67018200-67023800 Enhancers Brain Angular Gyrus brain
27 chr1:67018400-67021400 Weak transcription Brain Hippocampus Middle brain
28 chr1:67018400-67022000 Weak transcription NH-A brain
29 chr1:67018600-67019800 Genic enhancers NHDF-Ad bronchial
30 chr1:67018600-67020000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr1:67018600-67020000 Genic enhancers Muscle Satellite Cultured Cells --
32 chr1:67018600-67020200 Enhancers Osteobl bone
33 chr1:67018800-67019600 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
34 chr1:67018800-67022000 Weak transcription Aorta Aorta
35 chr1:67018800-67022000 Weak transcription Fetal Muscle Leg muscle
36 chr1:67018800-67022000 Weak transcription Left Ventricle heart
37 chr1:67019000-67019400 Weak transcription Breast Myoepithelial Primary Cells Breast
38 chr1:67019000-67021400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
39 chr1:67019000-67021400 Weak transcription Brain Cingulate Gyrus brain
40 chr1:67019000-67021800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
41 chr1:67019000-67022000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr1:67019000-67023600 Weak transcription iPS-18 Cell Line embryonic stem cell
43 chr1:67019000-67028600 Weak transcription iPS-20b Cell Line embryonic stem cell

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Last update: Aug 31, 2015