The 2.0 version of rSNPBase

Variant report

Variant rs12095697
Chromosome Location chr1:172666801-172666802
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:172649000-172667000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr1:172655800-172673800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr1:172664600-172667000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
4 chr1:172664800-172667000 Enhancers Primary T killer naive cells fromperipheralblood blood
5 chr1:172665200-172668200 Enhancers Primary T helper cells fromperipheralblood blood
6 chr1:172665200-172674200 Enhancers Primary T cells fromperipheralblood blood
7 chr1:172665200-172674200 Enhancers Primary Natural Killer cells fromperipheralblood blood
8 chr1:172665200-172675000 Enhancers Primary T helper naive cells fromperipheralblood blood
9 chr1:172665400-172667200 Bivalent Enhancer H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr1:172665600-172672200 Enhancers Primary hematopoietic stem cells short term culture blood
11 chr1:172665800-172667400 Flanking Active TSS Primary T helper cells PMA-I stimulated --
12 chr1:172665800-172670600 Enhancers Dnd41 blood
13 chr1:172666000-172667000 Weak transcription Thymus Thymus
14 chr1:172666000-172667400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr1:172666000-172668600 Enhancers Primary T regulatory cells fromperipheralblood blood
16 chr1:172666000-172668600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr1:172666000-172669200 Enhancers Primary B cells from cord blood blood
18 chr1:172666000-172669600 Enhancers Primary monocytes fromperipheralblood blood
19 chr1:172666000-172670000 Enhancers Primary hematopoietic stem cells blood
20 chr1:172666200-172667200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
21 chr1:172666200-172667200 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
22 chr1:172666200-172669600 Enhancers Primary mononuclear cells fromperipheralblood Blood
23 chr1:172666200-172670000 Enhancers GM12878-XiMat blood
24 chr1:172666200-172675600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
25 chr1:172666400-172667400 Enhancers Sigmoid Colon Sigmoid Colon
26 chr1:172666400-172669600 Enhancers Primary B cells from peripheral blood blood
27 chr1:172666400-172669800 Enhancers Fetal Thymus thymus
28 chr1:172666600-172667000 Weak transcription Small Intestine intestine
29 chr1:172666600-172667200 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
30 chr1:172666600-172669400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr1:172666600-172669400 Enhancers Monocytes-CD14+_RO01746 blood
32 chr1:172666800-172667000 Enhancers HUES6 Cell Line embryonic stem cell
33 chr1:172666800-172667000 Flanking Active TSS Primary T cells from cord blood blood
34 chr1:172666800-172667000 Enhancers K562 blood
35 chr1:172666800-172667200 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
36 chr1:172666800-172667400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr1:172666800-172667400 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
38 chr1:172666800-172669600 Enhancers HUVEC blood vessel

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Last update: Aug 31, 2015