Variant report

Variant	rs7553554
Chromosome Location	chr1:172696243-172696244
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:172689200-172696800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr1:172689200-172700400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
3	chr1:172691800-172696600	Enhancers	Placenta Amnion	Placenta Amnion
4	chr1:172693400-172712200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr1:172693800-172697400	Enhancers	Primary monocytes fromperipheralblood	blood
6	chr1:172694600-172697400	Weak transcription	Primary T helper naive cells from peripheral blood	blood
7	chr1:172695400-172696400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
8	chr1:172695600-172696400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
9	chr1:172695800-172696400	Enhancers	Primary hematopoietic stem cells	blood
10	chr1:172695800-172697000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr1:172696000-172696600	Enhancers	Primary hematopoietic stem cells short term culture	blood
12	chr1:172696000-172696800	Enhancers	Primary T cells fromperipheralblood	blood
13	chr1:172696000-172697200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
14	chr1:172696000-172697600	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
15	chr1:172696200-172696400	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
16	chr1:172696200-172696600	Enhancers	Lung	lung

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links