Variant report

Variant rs12096984
Chromosome Location chr1:171708643-171708644
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:171665600-171708800 Weak transcription Brain Angular Gyrus brain
2 chr1:171686600-171710400 Weak transcription Esophagus oesophagus
3 chr1:171686600-171710400 Weak transcription Gastric stomach
4 chr1:171692400-171710400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr1:171692400-171710400 Weak transcription Lung lung
6 chr1:171692600-171709800 Weak transcription Stomach Mucosa stomach
7 chr1:171692600-171710200 Weak transcription H1 Cell Line embryonic stem cell
8 chr1:171693200-171709800 Weak transcription Fetal Kidney kidney
9 chr1:171694800-171709000 Weak transcription HUES48 Cell Line embryonic stem cell
10 chr1:171695000-171710400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr1:171696000-171710200 Weak transcription H9 Cell Line embryonic stem cell
12 chr1:171696200-171710400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr1:171696400-171709800 Weak transcription Psoas Muscle Psoas
14 chr1:171697200-171710000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
15 chr1:171699800-171709600 Weak transcription Rectal Smooth Muscle rectum
16 chr1:171703000-171709600 Weak transcription Colonic Mucosa Colon
17 chr1:171705600-171710400 Weak transcription Placenta Amnion Placenta Amnion
18 chr1:171705800-171709400 Weak transcription HUES64 Cell Line embryonic stem cell
19 chr1:171706000-171709600 Weak transcription HepG2 liver
20 chr1:171706200-171708800 Weak transcription A549 lung
21 chr1:171706200-171709200 Weak transcription GM12878-XiMat blood
22 chr1:171706200-171709800 Weak transcription Aorta Aorta
23 chr1:171706200-171710400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr1:171706200-171710400 Weak transcription Pancreas Pancrea
25 chr1:171706400-171709200 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr1:171706400-171709400 Weak transcription Duodenum Mucosa Duodenum
27 chr1:171706400-171709400 Weak transcription HSMMtube muscle
28 chr1:171706400-171709800 Weak transcription Colon Smooth Muscle Colon
29 chr1:171706400-171709800 Weak transcription Skeletal Muscle Male skeletal muscle
30 chr1:171706400-171710000 Weak transcription Fetal Brain Male brain
31 chr1:171706400-171710200 Weak transcription Right Ventricle heart
32 chr1:171706400-171710200 Weak transcription Thymus Thymus
33 chr1:171706600-171709600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
34 chr1:171706600-171709600 Weak transcription Stomach Smooth Muscle stomach
35 chr1:171706600-171709800 Weak transcription Brain Inferior Temporal Lobe brain
36 chr1:171706600-171710000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr1:171706800-171709600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
38 chr1:171707000-171709800 Weak transcription iPS-20b Cell Line embryonic stem cell
39 chr1:171707000-171710400 Weak transcription Placenta Placenta
40 chr1:171707400-171709400 Weak transcription Cortex derived primary cultured neurospheres brain
41 chr1:171707400-171709600 Weak transcription Fetal Brain Female brain
42 chr1:171707400-171709600 Weak transcription Fetal Intestine Small intestine
43 chr1:171707400-171709600 Weak transcription Fetal Stomach stomach
44 chr1:171707400-171709800 Weak transcription Primary neutrophils fromperipheralblood blood
45 chr1:171707400-171709800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
46 chr1:171707400-171709800 Weak transcription Liver Liver
47 chr1:171707400-171710000 Weak transcription Fetal Lung lung
48 chr1:171707600-171708800 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
49 chr1:171707600-171709000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr1:171707600-171709200 Enhancers Primary T helper memory cells from peripheral blood 1 blood

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