Variant report

Variant rs6688447
Chromosome Location chr1:171702864-171702865
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:171665600-171705600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
2 chr1:171665600-171708800 Weak transcription Brain Angular Gyrus brain
3 chr1:171666000-171705400 Weak transcription Pancreas Pancrea
4 chr1:171668800-171705400 Weak transcription Right Ventricle heart
5 chr1:171668800-171708200 Weak transcription Small Intestine intestine
6 chr1:171669600-171705400 Weak transcription Fetal Brain Male brain
7 chr1:171686600-171710400 Weak transcription Esophagus oesophagus
8 chr1:171686600-171710400 Weak transcription Gastric stomach
9 chr1:171686800-171704600 Weak transcription NHEK skin
10 chr1:171687000-171704600 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr1:171687600-171704600 Weak transcription Colon Smooth Muscle Colon
12 chr1:171687600-171708000 Weak transcription K562 blood
13 chr1:171692400-171705800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr1:171692400-171708400 Weak transcription Brain Substantia Nigra brain
15 chr1:171692400-171710400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr1:171692400-171710400 Weak transcription Lung lung
17 chr1:171692600-171705000 Weak transcription Thymus Thymus
18 chr1:171692600-171705400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
19 chr1:171692600-171705600 Weak transcription Brain Cingulate Gyrus brain
20 chr1:171692600-171708400 Weak transcription Primary T killer memory cells from peripheral blood blood
21 chr1:171692600-171709800 Weak transcription Stomach Mucosa stomach
22 chr1:171692600-171710200 Weak transcription H1 Cell Line embryonic stem cell
23 chr1:171692800-171704800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr1:171692800-171705600 Weak transcription Muscle Satellite Cultured Cells --
25 chr1:171693200-171705000 Weak transcription Fetal Intestine Small intestine
26 chr1:171693200-171705400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr1:171693200-171709800 Weak transcription Fetal Kidney kidney
28 chr1:171694400-171705200 Weak transcription A549 lung
29 chr1:171694800-171704600 Weak transcription Placenta Amnion Placenta Amnion
30 chr1:171694800-171704800 Weak transcription GM12878-XiMat blood
31 chr1:171694800-171709000 Weak transcription HUES48 Cell Line embryonic stem cell
32 chr1:171695000-171710400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr1:171695600-171708400 Weak transcription ES-WA7 Cell Line embryonic stem cell
34 chr1:171696000-171710200 Weak transcription H9 Cell Line embryonic stem cell
35 chr1:171696200-171710400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
36 chr1:171696400-171704600 Weak transcription Fetal Muscle Leg muscle
37 chr1:171696400-171709800 Weak transcription Psoas Muscle Psoas
38 chr1:171697000-171705800 Weak transcription Fetal Brain Female brain
39 chr1:171697200-171710000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
40 chr1:171697400-171704600 Weak transcription Primary neutrophils fromperipheralblood blood
41 chr1:171697400-171704600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr1:171697400-171705200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
43 chr1:171697400-171705400 Weak transcription Fetal Lung lung
44 chr1:171697400-171705800 Weak transcription Cortex derived primary cultured neurospheres brain
45 chr1:171697400-171706000 Weak transcription iPS-20b Cell Line embryonic stem cell
46 chr1:171697600-171703400 Weak transcription Primary T cells fromperipheralblood blood
47 chr1:171697600-171704400 Weak transcription Primary hematopoietic stem cells short term culture blood
48 chr1:171697600-171704400 Weak transcription Osteobl bone
49 chr1:171697600-171704600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
50 chr1:171697600-171704600 Weak transcription Duodenum Smooth Muscle Duodenum

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