Variant report

rSNPs within LD-proxies of this variant (count:7)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv874264	chr2:72593243-72901170	Weak transcription Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv874265	chr2:72789764-72982609	Enhancers ZNF genes & repeats Weak transcription Strong transcription Flanking Active TSS Genic enhancers Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:72858400-72904000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
2	chr2:72866800-72902600	Weak transcription	Left Ventricle	heart
3	chr2:72873000-72903800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr2:72892000-72905400	Weak transcription	Pancreas	Pancrea
5	chr2:72892400-72900400	Weak transcription	Ovary	ovary
6	chr2:72895400-72897000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr2:72895400-72897200	Enhancers	Hela-S3	cervix
8	chr2:72895400-72902600	Weak transcription	Fetal Lung	lung
9	chr2:72895600-72897000	Enhancers	HMEC	breast
10	chr2:72895600-72897000	Enhancers	Osteobl	bone
11	chr2:72895800-72897000	Enhancers	Muscle Satellite Cultured Cells	--
12	chr2:72895800-72900400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
13	chr2:72895800-72901200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
14	chr2:72895800-72903400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
15	chr2:72896000-72896600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
16	chr2:72896000-72896800	Enhancers	NHEK	skin
17	chr2:72896000-72897000	Enhancers	NHDF-Ad	bronchial
18	chr2:72896000-72897000	Enhancers	NHLF	lung
19	chr2:72896000-72905400	Weak transcription	Psoas Muscle	Psoas
20	chr2:72896400-72896800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
21	chr2:72896400-72896800	Flanking Active TSS	A549	lung

Quick Search: